ATXN2 9540

Name: ATXN2	Sequence: fasta or formatted (1313aa)		NCBI GI: 171543895
Description: ataxin 2		Referenced in: Cerebellum Polymorphism
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 126 4 C cysteine 0.8 11 1 D aspartate 2.5 33 2 E glutamate 4.3 57 3 F phenylalanine 2.1 27 1 G glycine 6.5 85 4 H histidine 3.5 46 2 I isoleucine 2.4 31 2 K lysine 3.7 49 2 L leucine 4.1 54 3 M methionine 2.4 32 2 N asparagine 4.3 56 1 P proline 14.0 184 4 Q glutamine 7.8 102 23 R arginine 5.6 74 2 S serine 13.4 176 4 T threonine 5.0 65 2 V valine 5.1 67 3 W tryptophan 0.5 7 1 Y tyrosine 2.4 31 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxin 2 ATXN2L 0.224 ataxin 2 related protein isoform D ATXN2L 0.220 ataxin 2 related protein isoform B ATXN2L 0.220 ataxin 2 related protein isoform E ATXN2L 0.220 ataxin 2 related protein isoform C ATXN2L 0.220 ataxin 2 related protein isoform A NACA 0.026 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.026 PREDICTED: hypothetical protein FLJ22184 RERE 0.022 atrophin-1 like protein isoform b RERE 0.022 atrophin-1 like protein isoform a RERE 0.022 atrophin-1 like protein isoform a FLJ22184 0.021 PREDICTED: hypothetical protein FLJ22184 MUC6 0.020 mucin 6, gastric SRRM1 0.020 serine/arginine repetitive matrix 1 MLL2 0.019 myeloid/lymphoid or mixed-lineage leukemia 2 POLR2A 0.018 DNA-directed RNA polymerase II A ATN1 0.018 atrophin-1 ATN1 0.018 atrophin-1 SMARCA2 0.017 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.017 SWI/SNF-related matrix-associated actin-dependent re... FLJ22184 0.017 PREDICTED: hypothetical protein LOC80164 SEC31A 0.017 SEC31 homolog A isoform 1 SEC31A 0.017 SEC31 homolog A isoform 2 SEC31A 0.017 SEC31 homolog A isoform 1 PRG4 0.016 proteoglycan 4 isoform D PRG4 0.016 proteoglycan 4 isoform C PRG4 0.016 proteoglycan 4 isoform B PRG4 0.016 proteoglycan 4 isoform A MDC1 0.016 mediator of DNA-damage checkpoint 1 PCLO 0.016 piccolo isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.