Guide to the Human Genome
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Name: GRIN2D Sequence: fasta or formatted (1336aa) NCBI GI: 153946391
Description:

N-methyl-D-aspartate receptor subunit 2D precursor

Referenced in:

Glutamate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3        151           4
 C cysteine            1.9         25           2
 D aspartate           4.2         56           2
 E glutamate           4.9         65           2
 F phenylalanine       3.8         51           2
 G glycine            10.3        137           4
 H histidine           2.6         35           3
 I isoleucine          2.7         36           1
 K lysine              2.2         30           2
 L leucine             9.7        130           4
 M methionine          1.6         22           2
 N asparagine          1.8         24           2
 P proline            11.3        151           5
 Q glutamine           2.2         29           2
 R arginine            7.7        103           3
 S serine              7.0         93           2
 T threonine           3.7         49           2
 V valine              6.2         83           2
 W tryptophan          2.2         30           2
 Y tyrosine            2.7         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-methyl-D-aspartate receptor subunit 2D precursor ... 
GRIN2C                0.392   N-methyl-D-aspartate receptor subunit 2C precursor [...
GRIN2A                0.345   N-methyl-D-aspartate receptor subunit 2A isoform 2 ...
GRIN2A                0.345   N-methyl-D-aspartate receptor subunit 2A isoform 1 ...
GRIN2A                0.345   N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...
GRIN2B                0.331   N-methyl-D-aspartate receptor subunit 2B precursor ...
GRIN3B                0.095   glutamate receptor, ionotropic, N-methyl-D-aspartate...
GRIN3A                0.091   glutamate receptor, ionotropic, N-methyl-D-aspartat...
GRIN1                 0.086   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.086   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.086   NMDA receptor 1 isoform NR1-2 precursor 
GRIK5                 0.058   glutamate receptor KA2 precursor 
GRIK3                 0.058   glutamate receptor, ionotropic, kainate 3 precursor ...
GRIK4                 0.056   glutamate receptor KA1 precursor 
GRIA1                 0.056   glutamate receptor, ionotropic, AMPA 1 isoform 2 [H...
GRIA1                 0.056   glutamate receptor, ionotropic, AMPA 1 isoform 1 [H...
GRIK1                 0.056   glutamate receptor, ionotropic, kainate 1 isoform 2 ...
GRIK1                 0.056   glutamate receptor, ionotropic, kainate 1 isoform 1 p...
GRIA2                 0.054   glutamate receptor, ionotropic, AMPA 2 isoform 3 [H...
GRIA2                 0.054   glutamate receptor, ionotropic, AMPA 2 isoform 1 pre...
GRIK2                 0.054   glutamate receptor, ionotropic, kainate 2 isoform 1 ...
GRIK2                 0.054   glutamate receptor, ionotropic, kainate 2 isoform 2 ...
GRIA4                 0.054   glutamate receptor, ionotrophic, AMPA 4 isoform 1 p...
GRIA2                 0.053   glutamate receptor, ionotropic, AMPA 2 isoform 2 pr...
GRIA4                 0.053   glutamate receptor, ionotrophic, AMPA 4 isoform 2 p...
GRIA3                 0.051   glutamate receptor, ionotrophic, AMPA 3 isoform 1 p...
GRID2                 0.051   glutamate receptor, ionotropic, delta 2 
GRID1                 0.050   glutamate receptor, ionotropic, delta 1 precursor [H...
GRIA3                 0.050   glutamate receptor, ionotrophic, AMPA 3 isoform 2 p...
PRB2                  0.020   proline-rich protein BstNI subfamily 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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