Guide to the Human Genome
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Name: GRASP Sequence: fasta or formatted (395aa) NCBI GI: 32171221
Description:

GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         43           4
 C cysteine            1.3          5           1
 D aspartate           3.3         13           2
 E glutamate           7.8         31           4
 F phenylalanine       2.5         10           2
 G glycine            10.6         42           7
 H histidine           1.8          7           2
 I isoleucine          2.3          9           2
 K lysine              3.5         14           1
 L leucine            10.6         42           2
 M methionine          0.8          3           1
 N asparagine          1.5          6           1
 P proline            10.4         41           6
 Q glutamine           3.8         15           2
 R arginine            9.1         36           3
 S serine              5.6         22           2
 T threonine           5.1         20           1
 V valine              5.3         21           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GRP1 (general receptor for phosphoinositides 1)-asso... 
CYTIP                 0.207   cytohesin 1 interacting protein 
MAST3                 0.049   microtubule associated serine/threonine kinase 3 [H...
MAST1                 0.039   microtubule associated serine/threonine kinase 1 [Ho...
PHOX2A                0.037   paired-like homeobox 2a 
MAST4                 0.037   microtubule associated serine/threonine kinase fami...
PDZK1                 0.036   PDZ domain containing 1 
MAST2                 0.035   microtubule associated serine/threonine kinase 2 [H...
SLC9A3R2              0.033   solute carrier family 9 isoform 3 regulator 2 isofo...
SLC9A3R2              0.033   solute carrier family 9 isoform 3 regulator 2 isofor...
PTPN13                0.032   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.032   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.032   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.032   protein tyrosine phosphatase, non-receptor type 13 is...
RBM27                 0.031   RNA binding motif protein 27 
KHSRP                 0.031   KH-type splicing regulatory protein 
SHANK1                0.031   SH3 and multiple ankyrin repeat domains 1 
DMWD                  0.030   dystrophia myotonica-containing WD repeat motif prot...
SHANK2                0.028   SH3 and multiple ankyrin repeat domains 2 isoform 2 ...
SHANK3                0.028   SH3 and multiple ankyrin repeat domains 3 
SLC9A3R1              0.028   sodium/hydrogen exchanger regulatory factor 1 
SHANK2                0.028   SH3 and multiple ankyrin repeat domains 2 isoform 1...
GRIP1                 0.028   glutamate receptor interacting protein 1 
VASP                  0.028   vasodilator-stimulated phosphoprotein 
GRIN2D                0.028   N-methyl-D-aspartate receptor subunit 2D precursor ...
SFPQ                  0.028   splicing factor proline/glutamine rich (polypyrimidin...
PDCD7                 0.028   programmed cell death 7 
LIN7A                 0.027   lin-7 homolog A 
GOPC                  0.027   golgi associated PDZ and coiled-coil motif containing...
GOPC                  0.027   golgi associated PDZ and coiled-coil motif containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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