TAF10 32658

Name: TAF10	Sequence: fasta or formatted (218aa)		NCBI GI: 5454106
Description: TBP-related factor 10		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 18.8 41 3 C cysteine 0.9 2 1 D aspartate 4.6 10 1 E glutamate 4.1 9 1 F phenylalanine 1.8 4 1 G glycine 10.6 23 2 H histidine 0.9 2 1 I isoleucine 3.7 8 2 K lysine 4.6 10 2 L leucine 6.0 13 1 M methionine 1.8 4 1 N asparagine 2.8 6 1 P proline 10.6 23 2 Q glutamine 1.4 3 1 R arginine 3.7 8 2 S serine 10.6 23 2 T threonine 5.5 12 1 V valine 4.6 10 2 W tryptophan 0.0 0 0 Y tyrosine 3.2 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-related factor 10 HOXA13 0.061 homeobox A13 SALL3 0.059 sal-like 3 TAF4 0.057 TBP-associated factor 4 MAP1S 0.057 BPY2 interacting protein 1 DGKI 0.054 diacylglycerol kinase, iota PHOX2B 0.052 paired-like homeobox 2b HCN2 0.052 hyperpolarization activated cyclic nucleotide-gated... ATXN2 0.052 ataxin 2 XYLT1 0.049 xylosyltransferase I EVX2 0.049 even-skipped homeobox 2 NKX6-1 0.049 NK6 transcription factor related, locus 1 SAMD1 0.049 sterile alpha motif domain containing 1 LOC100291634 0.047 PREDICTED: hypothetical protein XP_002346062 LOC100291096 0.047 PREDICTED: hypothetical protein XP_002346952 LOC100287232 0.047 PREDICTED: hypothetical protein XP_002342816 LOC100287232 0.047 PREDICTED: hypothetical protein SRCAP 0.047 Snf2-related CBP activator protein COL3A1 0.047 collagen type III alpha 1 preproprotein MARCKS 0.047 myristoylated alanine-rich protein kinase C substra... ARID1A 0.047 AT rich interactive domain 1A isoform a ARID1A 0.047 AT rich interactive domain 1A isoform b MAGI2 0.047 membrane associated guanylate kinase, WW and PDZ dom... COL2A1 0.044 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.044 collagen, type II, alpha 1 isoform 2 precursor [Hom... DACH1 0.044 dachshund homolog 1 isoform b DACH1 0.044 dachshund homolog 1 isoform a DACH1 0.044 dachshund homolog 1 isoform c LOC100127891 0.044 PREDICTED: similar to hCG2042508 LOC100127891 0.044 PREDICTED: similar to hCG2042508 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.