Guide to the Human Genome
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Name: PCSK6 Sequence: fasta or formatted (487aa) NCBI GI: 20336186
Description:

paired basic amino acid cleaving system 4 isoform c preproprotein

Referenced in:

Peptide-processing Enzymes

Other entries for this name:
alt prot [956aa] paired basic amino acid cleaving system 4 isoform b preproprotein
alt prot [975aa] paired basic amino acid cleaving system 4 isoform g preproprotein
alt prot [962aa] paired basic amino acid cleaving system 4 isoform h preproprotein
alt prot [623aa] paired basic amino acid cleaving system 4 isoform e preproprotein
alt prot [652aa] paired basic amino acid cleaving system 4 isoform d preproprotein
alt prot [664aa] paired basic amino acid cleaving system 4 isoform f preproprotein
alt prot [969aa] paired basic amino acid cleaving system 4 isoform a preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         55           4
 C cysteine            1.8          9           1
 D aspartate           6.0         29           3
 E glutamate           3.1         15           2
 F phenylalanine       1.8          9           1
 G glycine            10.5         51           2
 H histidine           2.5         12           1
 I isoleucine          3.9         19           2
 K lysine              4.3         21           2
 L leucine             6.2         30           4
 M methionine          1.2          6           1
 N asparagine          4.9         24           2
 P proline             7.0         34           3
 Q glutamine           2.9         14           3
 R arginine            6.4         31           2
 S serine              6.8         33           2
 T threonine           5.1         25           2
 V valine              6.0         29           3
 W tryptophan          3.3         16           2
 Y tyrosine            5.1         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   paired basic amino acid cleaving system 4 isoform c ... 
PCSK6                 0.960   paired basic amino acid cleaving system 4 isoform e ...
PCSK6                 0.960   paired basic amino acid cleaving system 4 isoform f ...
PCSK6                 0.960   paired basic amino acid cleaving system 4 isoform d ...
PCSK6                 0.960   paired basic amino acid cleaving system 4 isoform h ...
PCSK6                 0.960   paired basic amino acid cleaving system 4 isoform g ...
PCSK6                 0.960   paired basic amino acid cleaving system 4 isoform a p...
PCSK6                 0.960   paired basic amino acid cleaving system 4 isoform b ...
PCSK5                 0.615   proprotein convertase subtilisin/kexin type 5 prepro...
FURIN                 0.507   furin preproprotein 
PCSK1                 0.452   proprotein convertase subtilisin/kexin type 1 prepro...
PCSK4                 0.451   proprotein convertase subtilisin/kexin type 4 
PCSK2                 0.345   proprotein convertase subtilisin/kexin type 2 
PCSK7                 0.328   proprotein convertase subtilisin/kexin type 7 prepro...
ATXN2                 0.024   ataxin 2 
XYLT1                 0.021   xylosyltransferase I 
FOXD1                 0.020   forkhead box D1 
PRR12                 0.020   proline rich 12 
SYNPO                 0.018   synaptopodin isoform A 
GRIN2D                0.017   N-methyl-D-aspartate receptor subunit 2D precursor ...
BOD1L                 0.017   biorientation of chromosomes in cell division 1-like...
LOC100290812          0.017   PREDICTED: hypothetical protein XP_002347678 
LOC100288205          0.017   PREDICTED: hypothetical protein XP_002343496 
GRASP                 0.016   GRP1 (general receptor for phosphoinositides 1)-asso...
NOVA2                 0.016   neuro-oncological ventral antigen 2 
TAF10                 0.015   TBP-related factor 10 
MEGF8                 0.015   multiple EGF-like-domains 8 
RANBP9                0.014   RAN binding protein 9 
TAF4                  0.014   TBP-associated factor 4 
FOXK1                 0.014   forkhead box K1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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