Guide to the Human Genome
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Name: RANBP9 Sequence: fasta or formatted (729aa) NCBI GI: 39812378
Description:

RAN binding protein 9

Referenced in:

Centrosome
Ran and Rag

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         66           5
 C cysteine            2.1         15           2
 D aspartate           4.1         30           2
 E glutamate           4.7         34           2
 F phenylalanine       3.0         22           1
 G glycine             9.3         68           3
 H histidine           3.3         24           2
 I isoleucine          3.4         25           1
 K lysine              3.6         26           2
 L leucine             7.5         55           3
 M methionine          2.6         19           1
 N asparagine          4.9         36           2
 P proline            10.6         77          11
 Q glutamine           5.8         42           8
 R arginine            4.1         30           2
 S serine              9.5         69           2
 T threonine           4.4         32           2
 V valine              4.7         34           2
 W tryptophan          0.7          5           1
 Y tyrosine            2.7         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAN binding protein 9 
RANBP10               0.555   RAN binding protein 10 
SPRYD3                0.040   SPRY domain containing 3 
WAS                   0.038   Wiskott-Aldrich syndrome protein 
SFPQ                  0.037   splicing factor proline/glutamine rich (polypyrimidin...
DIAPH1                0.037   diaphanous 1 isoform 2 
DIAPH1                0.037   diaphanous 1 isoform 1 
WASL                  0.036   Wiskott-Aldrich syndrome gene-like protein 
SF1                   0.036   splicing factor 1 isoform 1 
FMN1                  0.034   formin 1 
FMN2                  0.034   formin 2 
APBB1IP               0.033   amyloid beta (A4) precursor protein-binding, family ...
NACA                  0.032   nascent polypeptide-associated complex alpha subuni...
SF1                   0.032   splicing factor 1 isoform 2 
TAF4                  0.032   TBP-associated factor 4 
WBP11                 0.031   WW domain binding protein 11 
CPSF6                 0.030   cleavage and polyadenylation specific factor 6, 68 ...
ENAH                  0.030   enabled homolog isoform a 
ENAH                  0.030   enabled homolog isoform b 
FMNL2                 0.030   formin-like 2 
FOXI3                 0.030   forkhead box I3 
PRB1                  0.030   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRR12                 0.030   proline rich 12 
KDM6B                 0.029   lysine (K)-specific demethylase 6B 
PRB2                  0.028   proline-rich protein BstNI subfamily 2 
RAPH1                 0.028   Ras association and pleckstrin homology domains 1 is...
FMNL1                 0.028   formin-like 1 
WASF1                 0.028   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.028   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.028   Wiskott-Aldrich syndrome protein family member 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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