Guide to the Human Genome
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Name: PCSK6 Sequence: fasta or formatted (623aa) NCBI GI: 20336188
Description:

paired basic amino acid cleaving system 4 isoform e preproprotein

Referenced in:

Peptide-processing Enzymes

Other entries for this name:
alt prot [956aa] paired basic amino acid cleaving system 4 isoform b preproprotein
alt prot [975aa] paired basic amino acid cleaving system 4 isoform g preproprotein
alt prot [962aa] paired basic amino acid cleaving system 4 isoform h preproprotein
alt prot [487aa] paired basic amino acid cleaving system 4 isoform c preproprotein
alt prot [652aa] paired basic amino acid cleaving system 4 isoform d preproprotein
alt prot [664aa] paired basic amino acid cleaving system 4 isoform f preproprotein
alt prot [969aa] paired basic amino acid cleaving system 4 isoform a preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         63           4
 C cysteine            1.9         12           1
 D aspartate           5.8         36           3
 E glutamate           4.0         25           2
 F phenylalanine       1.9         12           1
 G glycine             9.1         57           2
 H histidine           2.9         18           1
 I isoleucine          3.5         22           2
 K lysine              4.5         28           2
 L leucine             7.4         46           4
 M methionine          1.3          8           1
 N asparagine          4.3         27           2
 P proline             6.4         40           3
 Q glutamine           3.7         23           3
 R arginine            6.4         40           2
 S serine              7.4         46           2
 T threonine           5.3         33           2
 V valine              6.9         43           3
 W tryptophan          2.6         16           1
 Y tyrosine            4.5         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   paired basic amino acid cleaving system 4 isoform e ... 
PCSK6                 0.997   paired basic amino acid cleaving system 4 isoform f ...
PCSK6                 0.997   paired basic amino acid cleaving system 4 isoform d ...
PCSK6                 0.996   paired basic amino acid cleaving system 4 isoform h ...
PCSK6                 0.996   paired basic amino acid cleaving system 4 isoform g ...
PCSK6                 0.996   paired basic amino acid cleaving system 4 isoform a p...
PCSK6                 0.996   paired basic amino acid cleaving system 4 isoform b ...
PCSK6                 0.759   paired basic amino acid cleaving system 4 isoform c ...
PCSK5                 0.636   proprotein convertase subtilisin/kexin type 5 prepro...
FURIN                 0.488   furin preproprotein 
PCSK4                 0.441   proprotein convertase subtilisin/kexin type 4 
PCSK1                 0.438   proprotein convertase subtilisin/kexin type 1 prepro...
PCSK2                 0.360   proprotein convertase subtilisin/kexin type 2 
PCSK7                 0.330   proprotein convertase subtilisin/kexin type 7 prepro...
ATXN2                 0.019   ataxin 2 
XYLT1                 0.016   xylosyltransferase I 
FOXD1                 0.016   forkhead box D1 
PRR12                 0.016   proline rich 12 
SYNPO                 0.014   synaptopodin isoform A 
GRIN2D                0.013   N-methyl-D-aspartate receptor subunit 2D precursor ...
BOD1L                 0.013   biorientation of chromosomes in cell division 1-like...
LOC100290812          0.013   PREDICTED: hypothetical protein XP_002347678 
LOC100288205          0.013   PREDICTED: hypothetical protein XP_002343496 
GRASP                 0.013   GRP1 (general receptor for phosphoinositides 1)-asso...
NOVA2                 0.013   neuro-oncological ventral antigen 2 
TAF10                 0.012   TBP-related factor 10 
MEGF8                 0.012   multiple EGF-like-domains 8 
RANBP9                0.011   RAN binding protein 9 
TAF4                  0.011   TBP-associated factor 4 
FOXK1                 0.011   forkhead box K1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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