| Name: C6orf186 | Sequence: fasta or formatted (366aa) | NCBI GI: 182765480 | |
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Description: chromosome 6 open reading frame 186
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.6 24 2 C cysteine 2.7 10 2 D aspartate 4.9 18 2 E glutamate 4.9 18 2 F phenylalanine 3.6 13 1 G glycine 7.9 29 4 H histidine 4.6 17 2 I isoleucine 3.6 13 1 K lysine 4.4 16 2 L leucine 10.7 39 2 M methionine 0.8 3 1 N asparagine 3.0 11 2 P proline 8.2 30 2 Q glutamine 3.6 13 1 R arginine 9.0 33 2 S serine 8.7 32 2 T threonine 3.3 12 2 V valine 4.4 16 2 W tryptophan 3.3 12 1 Y tyrosine 1.9 7 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 chromosome 6 open reading frame 186 COL7A1 0.028 alpha 1 type VII collagen precursor COL14A1 0.026 collagen, type XIV, alpha 1 COL4A4 0.024 alpha 4 type IV collagen precursor COL25A1 0.024 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.024 collagen, type XXV, alpha 1 isoform 2 COL5A1 0.023 alpha 1 type V collagen preproprotein COL17A1 0.023 alpha 1 type XVII collagen COL2A1 0.021 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.021 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL18A1 0.021 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.021 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.021 alpha 1 type XVIII collagen isoform 1 precursor [Ho... LRRC38 0.020 PREDICTED: leucine rich repeat containing 38 LRRC38 0.020 PREDICTED: leucine rich repeat containing 38 COL16A1 0.020 alpha 1 type XVI collagen precursor ZNF318 0.020 zinc finger protein 318 COL1A1 0.020 alpha 1 type I collagen preproprotein COL3A1 0.020 collagen type III alpha 1 preproprotein B4GALNT4 0.020 beta 1,4-N-acetylgalactosaminyltransferase-transfera... VASP 0.020 vasodilator-stimulated phosphoprotein CCBE1 0.020 collagen and calcium binding EGF domains 1 COL8A2 0.020 collagen, type VIII, alpha 2 ZFPM1 0.020 zinc finger protein, multitype 1 WBP11 0.020 WW domain binding protein 11 LOC100131102 0.019 PREDICTED: hypothetical protein LOC100131102 0.019 PREDICTED: hypothetical protein LOC100131102 0.019 PREDICTED: hypothetical protein COL12A1 0.019 collagen, type XII, alpha 1 short isoform precursor ... COL12A1 0.019 collagen, type XII, alpha 1 long isoform precursor [...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
