Guide to the Human Genome
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Name: ZNF318 Sequence: fasta or formatted (2279aa) NCBI GI: 120587019
Description:

zinc finger protein 318

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7        129           3
 C cysteine            1.3         29           1
 D aspartate           5.4        122           3
 E glutamate           9.0        206           5
 F phenylalanine       2.4         54           2
 G glycine             5.7        131           4
 H histidine           2.4         55           2
 I isoleucine          3.6         83           2
 K lysine              7.4        169           2
 L leucine             8.2        187           3
 M methionine          1.4         31           2
 N asparagine          3.0         69           2
 P proline             9.5        216          15
 Q glutamine           3.6         82           2
 R arginine            6.6        151           3
 S serine             12.8        291           3
 T threonine           4.8        109           2
 V valine              5.1        116           2
 W tryptophan          0.5         11           1
 Y tyrosine            1.7         38           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 318 
BRD4                  0.011   bromodomain-containing protein 4 isoform long 
SETD1B                0.009   SET domain containing 1B 
NEFH                  0.009   neurofilament, heavy polypeptide 200kDa 
WASF1                 0.009   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.009   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.009   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.009   Wiskott-Aldrich syndrome protein family member 1 [Hom...
NCOR2                 0.009   nuclear receptor co-repressor 2 isoform 1 
SFRS16                0.009   splicing factor, arginine/serine-rich 16 
PRG4                  0.008   proteoglycan 4 isoform B 
PRG4                  0.008   proteoglycan 4 isoform A 
RAPH1                 0.008   Ras association and pleckstrin homology domains 1 is...
SRRM1                 0.008   serine/arginine repetitive matrix 1 
WDR87                 0.008   NYD-SP11 protein 
C9orf75               0.008   hypothetical protein LOC286262 isoform 2 
C9orf75               0.008   hypothetical protein LOC286262 isoform 1 
ZNF341                0.008   zinc finger protein 341 
BOD1L                 0.008   biorientation of chromosomes in cell division 1-like...
ZNF827                0.008   zinc finger protein 827 
PRG4                  0.007   proteoglycan 4 isoform D 
PRG4                  0.007   proteoglycan 4 isoform C 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 2 
CRKRS                 0.007   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.007   Cdc2-related kinase, arginine/serine-rich isoform 1...
PCLO                  0.007   piccolo isoform 2 
PCLO                  0.007   piccolo isoform 1 
FMNL2                 0.007   formin-like 2 
TRIM66                0.007   tripartite motif-containing 66 
SCARF2                0.007   scavenger receptor class F, member 2 isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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