Guide to the Human Genome
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Name: ZFPM1 Sequence: fasta or formatted (1006aa) NCBI GI: 110556644
Description:

zinc finger protein, multitype 1

Referenced in:

Hematopoiesis and Erythrocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.0        131           4
 C cysteine            2.9         29           1
 D aspartate           3.2         32           2
 E glutamate           6.4         64           3
 F phenylalanine       1.7         17           1
 G glycine             9.0         91           2
 H histidine           3.2         32           1
 I isoleucine          1.9         19           1
 K lysine              3.6         36           2
 L leucine             7.6         76           3
 M methionine          0.7          7           1
 N asparagine          1.8         18           2
 P proline            16.4        165           6
 Q glutamine           3.2         32           3
 R arginine            6.5         65           4
 S serine              8.5         86           2
 T threonine           4.3         43           2
 V valine              3.6         36           2
 W tryptophan          0.5          5           1
 Y tyrosine            2.2         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein, multitype 1 
ZFPM2                 0.170   zinc finger protein, multitype 2 
FLJ22184              0.040   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.039   PREDICTED: hypothetical protein FLJ22184 
NACA                  0.038   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.036   PREDICTED: hypothetical protein LOC80164 
ZNF628                0.036   zinc finger protein 628 
COL1A1                0.035   alpha 1 type I collagen preproprotein 
TAF4                  0.032   TBP-associated factor 4 
FMN2                  0.031   formin 2 
PCLO                  0.030   piccolo isoform 2 
PCLO                  0.030   piccolo isoform 1 
ZNF541                0.029   zinc finger protein 541 
COL2A1                0.029   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.029   collagen, type II, alpha 1 isoform 2 precursor [Hom...
CASKIN2               0.027   cask-interacting protein 2 isoform b 
CASKIN2               0.027   cask-interacting protein 2 isoform a 
RAPH1                 0.027   Ras association and pleckstrin homology domains 1 is...
COL3A1                0.027   collagen type III alpha 1 preproprotein 
COL4A5                0.027   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.027   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.027   type IV collagen alpha 5 isoform 3 precursor 
COL5A1                0.026   alpha 1 type V collagen preproprotein 
PRB2                  0.026   proline-rich protein BstNI subfamily 2 
CPSF6                 0.025   cleavage and polyadenylation specific factor 6, 68 ...
COL5A2                0.025   alpha 2 type V collagen preproprotein 
SF3A2                 0.025   splicing factor 3a, subunit 2 
PRR12                 0.025   proline rich 12 
PTPN23                0.025   protein tyrosine phosphatase, non-receptor type 23 [...
MLL2                  0.024   myeloid/lymphoid or mixed-lineage leukemia 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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