Guide to the Human Genome
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Name: LOC100131102 Sequence: fasta or formatted (159aa) NCBI GI: 239754940
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {285aa} PREDICTED: hypothetical protein
alt prot {195aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.9         30           3
 C cysteine            0.6          1           1
 D aspartate           1.3          2           1
 E glutamate           1.3          2           1
 F phenylalanine       1.3          2           1
 G glycine            14.5         23           5
 H histidine           0.6          1           1
 I isoleucine          1.3          2           1
 K lysine              0.0          0           0
 L leucine             6.3         10           1
 M methionine          0.6          1           1
 N asparagine          0.0          0           0
 P proline            25.2         40           3
 Q glutamine           3.8          6           1
 R arginine           10.1         16           3
 S serine              7.5         12           2
 T threonine           0.6          1           1
 V valine              5.7          9           2
 W tryptophan          0.6          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100131102          0.805   PREDICTED: hypothetical protein 
LOC100131102          0.805   PREDICTED: hypothetical protein 
NACA                  0.130   nascent polypeptide-associated complex alpha subuni...
SAMD1                 0.127   sterile alpha motif domain containing 1 
FMN2                  0.114   formin 2 
FMNL1                 0.111   formin-like 1 
CPSF6                 0.111   cleavage and polyadenylation specific factor 6, 68 ...
PRR12                 0.111   proline rich 12 
INF2                  0.107   inverted formin 2 isoform 2 
INF2                  0.107   inverted formin 2 isoform 1 
COL22A1               0.104   collagen, type XXII, alpha 1 
ENAH                  0.104   enabled homolog isoform a 
ENAH                  0.104   enabled homolog isoform b 
LOC645529             0.101   PREDICTED: similar to Putative acrosin-like proteas...
WBP11                 0.101   WW domain binding protein 11 
UNCX                  0.098   UNC homeobox 
MEX3D                 0.098   ring finger and KH domain containing 1 
PDCD7                 0.098   programmed cell death 7 
RAPH1                 0.098   Ras association and pleckstrin homology domains 1 is...
KIAA1522              0.098   hypothetical protein LOC57648 
FMN1                  0.098   formin 1 
SH3BP1                0.098   SH3-domain binding protein 1 
FLJ22184              0.094   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.094   PREDICTED: hypothetical protein LOC80164 
TAF4                  0.094   TBP-associated factor 4 
LOC100292723          0.094   PREDICTED: hypothetical protein 
BAT3                  0.094   HLA-B associated transcript-3 isoform b 
BAT3                  0.094   HLA-B associated transcript-3 isoform b 
BAT3                  0.094   HLA-B associated transcript-3 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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