Search of human proteins with 17986001

Search of human proteins with 17986001

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|17986001 major histocompatibility complex, class I, B
precursor [Homo sapiens]
         (362 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17986001 major histocompatibility complex, class I, B precurs...   744   0.0  
gi|52630342 major histocompatibility complex, class I, C precurs...   641   0.0  
gi|24797067 major histocompatibility complex, class I, A precurs...   640   0.0  
gi|62912479 major histocompatibility complex, class I, E precurs...   575   e-164
gi|4504415 major histocompatibility complex, class I, G precurso...   572   e-163
gi|149158702 major histocompatibility complex, class I, F isofor...   568   e-162
gi|149158698 major histocompatibility complex, class I, F isofor...   567   e-162
gi|89063265 PREDICTED: similar to MHC class I antigen [Homo sapi...   500   e-142
gi|149158700 major histocompatibility complex, class I, F isofor...   320   1e-87
gi|4504417 major histocompatibility complex, class I-related [Ho...   233   3e-61
gi|4504377 hemochromatosis protein isoform 1 precursor [Homo sap...   215   4e-56
gi|4502337 alpha-2-glycoprotein 1, zinc [Homo sapiens]                207   1e-53
gi|21040353 hemochromatosis protein isoform 9 precursor [Homo sa...   201   6e-52
gi|21040347 hemochromatosis protein isoform 6 precursor [Homo sa...   196   2e-50
gi|21040349 hemochromatosis protein isoform 7 precursor [Homo sa...   177   2e-44
gi|21040351 hemochromatosis protein isoform 8 precursor [Homo sa...   158   8e-39
gi|167857788 MHC class I polypeptide-related sequence B [Homo sa...   145   5e-35
gi|209862839 Fc fragment of IgG, receptor, transporter, alpha [H...   142   6e-34
gi|4758346 Fc fragment of IgG, receptor, transporter, alpha [Hom...   142   6e-34
gi|4557751 MHC class I polypeptide-related sequence A [Homo sapi...   140   2e-33
gi|21040355 hemochromatosis protein isoform 10 precursor [Homo s...   118   9e-27
gi|21040343 hemochromatosis protein isoform 4 precursor [Homo sa...   118   9e-27
gi|21040341 hemochromatosis protein isoform 3 precursor [Homo sa...   108   7e-24
gi|239740918 PREDICTED: similar to major histocompatibility comp...    74   3e-13
gi|169168591 PREDICTED: similar to major histocompatibility comp...    73   3e-13
gi|4502649 CD1D antigen precursor [Homo sapiens]                       73   5e-13
gi|239740920 PREDICTED: similar to major histocompatibility comp...    72   8e-13
gi|24797076 major histocompatibility complex, class II, DP beta ...    71   2e-12
gi|110618224 CD1A antigen precursor [Homo sapiens]                     71   2e-12
gi|239758095 PREDICTED: similar to major histocompatibility comp...    70   2e-12

>gi|17986001 major histocompatibility complex, class I, B precursor
           [Homo sapiens]
          Length = 362

 Score =  744 bits (1922), Expect = 0.0
 Identities = 362/362 (100%), Positives = 362/362 (100%)

Query: 1   MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRF 60
           MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRF
Sbjct: 1   MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRF 60

Query: 61  DSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQ 120
           DSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQ
Sbjct: 61  DSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQ 120

Query: 121 SMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQR 180
           SMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQR
Sbjct: 121 SMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQR 180

Query: 181 RAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLT 240
           RAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLT
Sbjct: 181 RAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLT 240

Query: 241 WQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP 300
           WQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP
Sbjct: 241 WQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP 300

Query: 301 SSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSDVSL 360
           SSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSDVSL
Sbjct: 301 SSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSDVSL 360

Query: 361 TA 362
           TA
Sbjct: 361 TA 362


>gi|52630342 major histocompatibility complex, class I, C precursor
           [Homo sapiens]
          Length = 366

 Score =  641 bits (1654), Expect = 0.0
 Identities = 313/361 (86%), Positives = 331/361 (91%), Gaps = 1/361 (0%)

Query: 1   MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRF 60
           M VMAPR +LLLLS  LALTETWA SHSMRYF T+VSRPGRGEPRFISVGYVDDTQFVRF
Sbjct: 1   MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRF 60

Query: 61  DSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQ 120
           DSDAASPR EPRAPW+EQEGPEYWDR TQ YK QAQ DR SLRNLRGYYNQSE GSHTLQ
Sbjct: 61  DSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEDGSHTLQ 120

Query: 121 SMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQR 180
            M GCD+GPDGRLLRG+DQ AYDGKDYIALNEDLRSWTAADTAAQITQRK EAAR AEQ 
Sbjct: 121 RMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQL 180

Query: 181 RAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLT 240
           RAYLEG CVEWLRRYLENGK+ L+RA+PPKTHVTHHP+SDHEATLRCWALGFYPAEITLT
Sbjct: 181 RAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWALGFYPAEITLT 240

Query: 241 WQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP 300
           WQRDGEDQTQDTELVETRPAGD TFQKWAAVVVPSG+EQRYTCH+QHEGL +PLTL WEP
Sbjct: 241 WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSWEP 300

Query: 301 SSQSTVPIVGIVAGLAVLAVV-VIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSDVS 359
           SSQ T+PI+GIVAGLAVL V+ V+GAVV A+MCRRKSSGGKGGS SQAACS+SAQGSD S
Sbjct: 301 SSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQGSDES 360

Query: 360 L 360
           L
Sbjct: 361 L 361


>gi|24797067 major histocompatibility complex, class I, A precursor
           [Homo sapiens]
          Length = 365

 Score =  640 bits (1650), Expect = 0.0
 Identities = 310/362 (85%), Positives = 329/362 (90%)

Query: 1   MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRF 60
           M VMAPRT+LLLLS ALALT+TWAGSHSMRYF+TSVSRPGRGEPRFI+VGYVDDTQFVRF
Sbjct: 1   MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRF 60

Query: 61  DSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQ 120
           DSDAAS R EPRAPWIEQEGPEYWD+ T+  KAQ+QTDR  L  LRGYYNQSEAGSHT+Q
Sbjct: 61  DSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQ 120

Query: 121 SMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQR 180
            MYGCDVG DGR LRG+ Q AYDGKDYIALNEDLRSWTAAD AAQIT+RKWEAA EAEQ 
Sbjct: 121 IMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQL 180

Query: 181 RAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLT 240
           RAYL+G CVEWLRRYLENGK+ L+R DPPKTH+THHPISDHEATLRCWALGFYPAEITLT
Sbjct: 181 RAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLT 240

Query: 241 WQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP 300
           WQRDGEDQTQDTELVETRPAGD TFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE 
Sbjct: 241 WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL 300

Query: 301 SSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSDVSL 360
           SSQ T+PIVGI+AGL +L  V+ GAVVAAVM RRKSS  KGGSY+QAA SDSAQGSDVSL
Sbjct: 301 SSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSL 360

Query: 361 TA 362
           TA
Sbjct: 361 TA 362


>gi|62912479 major histocompatibility complex, class I, E precursor
           [Homo sapiens]
          Length = 358

 Score =  575 bits (1482), Expect = e-164
 Identities = 274/354 (77%), Positives = 310/354 (87%)

Query: 4   MAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSD 63
           M   T+LLLLS ALALT+TWAGSHS++YF+TSVSRPGRGEPRFISVGYVDDTQFVRFD+D
Sbjct: 1   MVDGTLLLLLSEALALTQTWAGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDND 60

Query: 64  AASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMY 123
           AASPR  PRAPW+EQEG EYWDR T+  +  AQ  R +LR LRGYYNQSEAGSHTLQ M+
Sbjct: 61  AASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMH 120

Query: 124 GCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAY 183
           GC++GPDGR LRG++Q+AYDGKDY+ LNEDLRSWTA DTAAQI+++K   A EAE +RAY
Sbjct: 121 GCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAY 180

Query: 184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243
           LE  CVEWL +YLE GK+ L   +PPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQ+
Sbjct: 181 LEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQ 240

Query: 244 DGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQ 303
           DGE  TQDTELVETRPAGD TFQKWAAVVVPSGEEQRYTCHVQHEGLP+P+TLRW+P+SQ
Sbjct: 241 DGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPASQ 300

Query: 304 STVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSD 357
            T+PIVGI+AGL +L  VV GAVVAAV+ R+KSSGGKGGSYS+A  SDSAQGS+
Sbjct: 301 PTIPIVGIIAGLVLLGSVVSGAVVAAVIWRKKSSGGKGGSYSKAEWSDSAQGSE 354


>gi|4504415 major histocompatibility complex, class I, G precursor
           [Homo sapiens]
          Length = 338

 Score =  572 bits (1475), Expect = e-163
 Identities = 273/337 (81%), Positives = 300/337 (89%)

Query: 1   MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRF 60
           M+VMAPRT+ LLLS AL LTETWAGSHSMRYF  +VSRPGRGEPRFI++GYVDDTQFVRF
Sbjct: 1   MVVMAPRTLFLLLSGALTLTETWAGSHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRF 60

Query: 61  DSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQ 120
           DSD+A PR EPRAPW+EQEGPEYW+  T+  KA AQTDR +L+ LRGYYNQSEA SHTLQ
Sbjct: 61  DSDSACPRMEPRAPWVEQEGPEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEASSHTLQ 120

Query: 121 SMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQR 180
            M GCD+G DGRLLRG++QYAYDGKDY+ALNEDLRSWTAADTAAQI++RK EAA  AEQR
Sbjct: 121 WMIGCDLGSDGRLLRGYEQYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAANVAEQR 180

Query: 181 RAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLT 240
           RAYLEG CVEWL RYLENGK+ L+RADPPKTHVTHHP+ D+EATLRCWALGFYPAEI LT
Sbjct: 181 RAYLEGTCVEWLHRYLENGKEMLQRADPPKTHVTHHPVFDYEATLRCWALGFYPAEIILT 240

Query: 241 WQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP 300
           WQRDGEDQTQD ELVETRPAGD TFQKWAAVVVPSGEEQRYTCHVQHEGLP+PL LRW+ 
Sbjct: 241 WQRDGEDQTQDVELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLMLRWKQ 300

Query: 301 SSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSS 337
           SS  T+PI+GIVAGL VLA VV GA VAAV+ R+KSS
Sbjct: 301 SSLPTIPIMGIVAGLVVLAAVVTGAAVAAVLWRKKSS 337


>gi|149158702 major histocompatibility complex, class I, F isoform 1
           precursor [Homo sapiens]
          Length = 442

 Score =  568 bits (1464), Expect = e-162
 Identities = 276/353 (78%), Positives = 302/353 (85%)

Query: 4   MAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSD 63
           MAPR++LLLLS ALALT+TWAGSHS+RYF T+VSRPGRGEPR+I+V YVDDTQF+RFDSD
Sbjct: 1   MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD 60

Query: 64  AASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMY 123
           AA PR EPR PW+EQEGP+YW+  T   KA AQTDR +LRNL   YNQSEAGSHTLQ M 
Sbjct: 61  AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN 120

Query: 124 GCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAY 183
           GCD+GPDGRLLRG+ Q+AYDGKDYI+LNEDLRSWTAADT AQITQR +EA   AE+ R Y
Sbjct: 121 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY 180

Query: 184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243
           LEGEC+E LRRYLENGK+ L+RADPPK HV HHPISDHEATLRCWALGFYPAEITLTWQR
Sbjct: 181 LEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQR 240

Query: 244 DGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQ 303
           DGE+QTQDTELVETRPAGD TFQKWAAVVVP GEEQRYTCHVQHEGLP+PL LRWE S Q
Sbjct: 241 DGEEQTQDTELVETRPAGDGTFQKWAAVVVPPGEEQRYTCHVQHEGLPQPLILRWEQSPQ 300

Query: 304 STVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGS 356
            T+PIVGIVAGL VL  VV GAVVAAVM R+KSS    GSYSQAA      G+
Sbjct: 301 PTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGN 353


>gi|149158698 major histocompatibility complex, class I, F isoform 2
           precursor [Homo sapiens]
          Length = 346

 Score =  567 bits (1461), Expect = e-162
 Identities = 275/345 (79%), Positives = 300/345 (86%)

Query: 4   MAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSD 63
           MAPR++LLLLS ALALT+TWAGSHS+RYF T+VSRPGRGEPR+I+V YVDDTQF+RFDSD
Sbjct: 1   MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD 60

Query: 64  AASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMY 123
           AA PR EPR PW+EQEGP+YW+  T   KA AQTDR +LRNL   YNQSEAGSHTLQ M 
Sbjct: 61  AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN 120

Query: 124 GCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAY 183
           GCD+GPDGRLLRG+ Q+AYDGKDYI+LNEDLRSWTAADT AQITQR +EA   AE+ R Y
Sbjct: 121 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY 180

Query: 184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243
           LEGEC+E LRRYLENGK+ L+RADPPK HV HHPISDHEATLRCWALGFYPAEITLTWQR
Sbjct: 181 LEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQR 240

Query: 244 DGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQ 303
           DGE+QTQDTELVETRPAGD TFQKWAAVVVP GEEQRYTCHVQHEGLP+PL LRWE S Q
Sbjct: 241 DGEEQTQDTELVETRPAGDGTFQKWAAVVVPPGEEQRYTCHVQHEGLPQPLILRWEQSPQ 300

Query: 304 STVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAA 348
            T+PIVGIVAGL VL  VV GAVVAAVM R+KSS    GSYSQAA
Sbjct: 301 PTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAA 345


>gi|89063265 PREDICTED: similar to MHC class I antigen [Homo
           sapiens]
          Length = 366

 Score =  500 bits (1287), Expect = e-142
 Identities = 244/325 (75%), Positives = 272/325 (83%), Gaps = 4/325 (1%)

Query: 25  GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYW 84
           GSHS+RYFYT+VSRPG GEPRFISVGYVDDTQFVRFDSD+A+PREEPRAPW+EQEGPEYW
Sbjct: 38  GSHSLRYFYTAVSRPGLGEPRFISVGYVDDTQFVRFDSDSANPREEPRAPWMEQEGPEYW 97

Query: 85  DRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDG 144
           D  T+I K  AQ+ R  L  LRGYYNQSEAGSHTLQ MYGCDVGPDGR LRG  Q AYDG
Sbjct: 98  DEQTRIVKDTAQSFRVGLNTLRGYYNQSEAGSHTLQLMYGCDVGPDGRFLRGFMQDAYDG 157

Query: 145 KDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLE 204
           +DYIALNEDLRSWTAADTAAQIT+RK EAA  AE++R YLEG CVE LRRYLE GKD L 
Sbjct: 158 RDYIALNEDLRSWTAADTAAQITKRKREAAGAAERQRNYLEGRCVEGLRRYLETGKDALL 217

Query: 205 RADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT 264
           RADPPK HVTHHPIS+ E TLRCWALGFYP EI+LTWQR+GEDQTQD ELVETRP+GD T
Sbjct: 218 RADPPKAHVTHHPISEREVTLRCWALGFYPEEISLTWQREGEDQTQDMELVETRPSGDGT 277

Query: 265 FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIG 324
           FQKWAA+VVPSGEEQRYTC VQHEGL +PLTLRWEP  Q++  I+GI+ GL +L   V+ 
Sbjct: 278 FQKWAALVVPSGEEQRYTCRVQHEGLQEPLTLRWEP-PQTSFLIMGIIVGLVLL---VVA 333

Query: 325 AVVAAVMCRRKSSGGKGGSYSQAAC 349
            V  AV+ R+K SG +G   S+ +C
Sbjct: 334 LVAGAVIWRKKRSGREGREGSEFSC 358


>gi|149158700 major histocompatibility complex, class I, F isoform 3
           precursor [Homo sapiens]
          Length = 254

 Score =  320 bits (820), Expect = 1e-87
 Identities = 154/204 (75%), Positives = 176/204 (86%)

Query: 4   MAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSD 63
           MAPR++LLLLS ALALT+TWAGSHS+RYF T+VSRPGRGEPR+I+V YVDDTQF+RFDSD
Sbjct: 1   MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD 60

Query: 64  AASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMY 123
           AA PR EPR PW+EQEGP+YW+  T   KA AQTDR +LRNL   YNQSEAGSHTLQ M 
Sbjct: 61  AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN 120

Query: 124 GCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAY 183
           GCD+GPDGRLLRG+ Q+AYDGKDYI+LNEDLRSWTAADT AQITQR +EA   AE+ R Y
Sbjct: 121 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY 180

Query: 184 LEGECVEWLRRYLENGKDKLERAD 207
           LEGEC+E LRRYLENGK+ L+RA+
Sbjct: 181 LEGECLELLRRYLENGKETLQRAE 204



 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 37/52 (71%), Positives = 39/52 (75%)

Query: 297 RWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAA 348
           R E S Q T+PIVGIVAGL VL  VV GAVVAAVM R+KSS    GSYSQAA
Sbjct: 202 RAEQSPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAA 253


>gi|4504417 major histocompatibility complex, class I-related [Homo
           sapiens]
          Length = 341

 Score =  233 bits (593), Expect = 3e-61
 Identities = 131/338 (38%), Positives = 191/338 (56%), Gaps = 13/338 (3%)

Query: 10  LLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRE 69
           LL L   L +  + + +HS+RYF   VS P  G P FISVGYVD      +DS   + ++
Sbjct: 8   LLPLIIVLMVKHSDSRTHSLRYFRLGVSDPIHGVPEFISVGYVDSHPITTYDS--VTRQK 65

Query: 70  EPRAPWI-EQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVG 128
           EPRAPW+ E   P++W+R TQ+ +   Q  +  L+ L+ +YN S  GSHT Q M GC++ 
Sbjct: 66  EPRAPWMAENLAPDHWERYTQLLRGWQQMFKVELKRLQRHYNHS--GSHTYQRMIGCELL 123

Query: 129 PDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAR-EAEQRRAYLEGE 187
            DG    G  QYAYDG+D++  N+D  SW A D  A   ++ WEA + E   ++ +LE E
Sbjct: 124 EDGSTT-GFLQYAYDGQDFLIFNKDTLSWLAVDNVAHTIKQAWEANQHELLYQKNWLEEE 182

Query: 188 CVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGED 247
           C+ WL+R+LE GKD L+R +PP   V           L C A GFYP EI +TW ++GE+
Sbjct: 183 CIAWLKRFLEYGKDTLQRTEPPLVRVNRKETFPGVTALFCKAHGFYPPEIYMTWMKNGEE 242

Query: 248 QTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVP 307
             Q+ +  +  P+GD T+Q WA++ +       Y+CHV+H G+   L +   P    T+P
Sbjct: 243 IVQEIDYGDILPSGDGTYQAWASIELDPQSSNLYSCHVEHCGVHMVLQV---PQESETIP 299

Query: 308 IV-GIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY 344
           +V   V+G  VL +V+ G  V  ++ RR+     G  Y
Sbjct: 300 LVMKAVSGSIVLVIVLAG--VGVLVWRRRPREQNGAIY 335


>gi|4504377 hemochromatosis protein isoform 1 precursor [Homo
           sapiens]
          Length = 348

 Score =  215 bits (548), Expect = 4e-56
 Identities = 123/342 (35%), Positives = 185/342 (54%), Gaps = 9/342 (2%)

Query: 6   PRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAA 65
           P  +LL+L     L      SHS+ Y +   S    G   F ++GYVDD  FV +D +  
Sbjct: 7   PALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHE-- 64

Query: 66  SPREEPRAPWIEQE-GPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG 124
           S R EPR PW+      + W + +Q  K            +   +N S+  SHTLQ + G
Sbjct: 65  SRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKE-SHTLQVILG 123

Query: 125 CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAR-EAEQRRAY 183
           C++  D     G+ +Y YDG+D++    D   W AA+  A  T+ +WE  +  A Q RAY
Sbjct: 124 CEMQEDNST-EGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAY 182

Query: 184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243
           LE +C   L++ LE G+  L++  PP   VTHH ++    TLRC AL +YP  IT+ W +
Sbjct: 183 LERDCPAQLQQLLELGRGVLDQQVPPLVKVTHH-VTSSVTTLRCRALNYYPQNITMKWLK 241

Query: 244 DGEDQ-TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSS 302
           D +    ++ E  +  P GD T+Q W  + VP GEEQRYTC V+H GL +PL + WEPS 
Sbjct: 242 DKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPSP 301

Query: 303 QSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY 344
             T+ ++G+++G+AV  V++   ++  ++ +R+ S G  G Y
Sbjct: 302 SGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHY 342


>gi|4502337 alpha-2-glycoprotein 1, zinc [Homo sapiens]
          Length = 298

 Score =  207 bits (527), Expect = 1e-53
 Identities = 116/294 (39%), Positives = 166/294 (56%), Gaps = 8/294 (2%)

Query: 10  LLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPRE 69
           LLLL       E   G +S+ Y YT +S+     P F ++G ++D QF R++S     + 
Sbjct: 11  LLLLLGPAVPQENQDGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSK--DRKS 68

Query: 70  EPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVGP 129
           +P   W + EG E W +++Q+ KA+     E+L+++  YYN S  GSH LQ  +GC++  
Sbjct: 69  QPMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYNDSN-GSHVLQGRFGCEI-E 126

Query: 130 DGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQR-RAYLEGEC 188
           + R      +Y YDGKDYI  N+++ +W   D AAQIT++KWEA     QR +AYLE EC
Sbjct: 127 NNRSSGAFWKYYYDGKDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEEC 186

Query: 189 VEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQ 248
              LR+YL+  K+ L+R DPP   VT H     +  L+C A  FYP +I + W R GE  
Sbjct: 187 PATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGE-- 244

Query: 249 TQDTEL-VETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS 301
            Q+ EL  +    G+ T+Q W  V VP  +   Y+CHVQH  L +PL + WE S
Sbjct: 245 VQEPELRGDVLHNGNGTYQSWVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEAS 298


>gi|21040353 hemochromatosis protein isoform 9 precursor [Homo
           sapiens]
          Length = 325

 Score =  201 bits (512), Expect = 6e-52
 Identities = 112/303 (36%), Positives = 170/303 (56%), Gaps = 9/303 (2%)

Query: 45  RFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQE-GPEYWDRNTQIYKAQAQTDRESLR 103
           R + +GYVDD  FV +D +  S R EPR PW+      + W + +Q  K           
Sbjct: 23  RLLPLGYVDDQLFVFYDHE--SRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFW 80

Query: 104 NLRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTA 163
            +   +N S+  SHTLQ + GC++  D     G+ +Y YDG+D++    D   W AA+  
Sbjct: 81  TIMENHNHSKE-SHTLQVILGCEMQEDNST-EGYWKYGYDGQDHLEFCPDTLDWRAAEPR 138

Query: 164 AQITQRKWEAAR-EAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHE 222
           A  T+ +WE  +  A Q RAYLE +C   L++ LE G+  L++  PP   VTHH ++   
Sbjct: 139 AWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHH-VTSSV 197

Query: 223 ATLRCWALGFYPAEITLTWQRDGEDQ-TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY 281
            TLRC AL +YP  IT+ W +D +    ++ E  +  P GD T+Q W  + VP GEEQRY
Sbjct: 198 TTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRY 257

Query: 282 TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKG 341
           TC V+H GL +PL + WEPS   T+ ++G+++G+AV  V++   ++  ++ +R+ S G  
Sbjct: 258 TCQVEHPGLDQPLIVIWEPSPSGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAM 316

Query: 342 GSY 344
           G Y
Sbjct: 317 GHY 319


>gi|21040347 hemochromatosis protein isoform 6 precursor [Homo
           sapiens]
          Length = 334

 Score =  196 bits (499), Expect = 2e-50
 Identities = 117/342 (34%), Positives = 177/342 (51%), Gaps = 23/342 (6%)

Query: 6   PRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAA 65
           P  +LL+L     L      SHS+ Y +   S    G   F ++GYVDD  FV +D +  
Sbjct: 7   PALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHE-- 64

Query: 66  SPREEPRAPWIEQE-GPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG 124
           S R EPR PW+      + W + +Q  K            +   +N S+  SHTLQ + G
Sbjct: 65  SRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKE-SHTLQVILG 123

Query: 125 CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAR-EAEQRRAY 183
           C++  D     G+ +Y YDG+D++    D   W AA+  A  T+ +WE  +  A Q RAY
Sbjct: 124 CEMQEDNST-EGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAY 182

Query: 184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243
           LE +C   L++ LE G+  L++                  TLRC AL +YP  IT+ W +
Sbjct: 183 LERDCPAQLQQLLELGRGVLDQ---------------QVTTLRCRALNYYPQNITMKWLK 227

Query: 244 DGEDQ-TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSS 302
           D +    ++ E  +  P GD T+Q W  + VP GEEQRYTC V+H GL +PL + WEPS 
Sbjct: 228 DKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPSP 287

Query: 303 QSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY 344
             T+ ++G+++G+AV  V++   ++  ++ +R+ S G  G Y
Sbjct: 288 SGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHY 328


>gi|21040349 hemochromatosis protein isoform 7 precursor [Homo
           sapiens]
          Length = 260

 Score =  177 bits (448), Expect = 2e-44
 Identities = 91/231 (39%), Positives = 138/231 (59%), Gaps = 5/231 (2%)

Query: 116 SHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAR 175
           SHTLQ + GC++  D     G+ +Y YDG+D++    D   W AA+  A  T+ +WE  +
Sbjct: 27  SHTLQVILGCEMQEDNST-EGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHK 85

Query: 176 -EAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYP 234
             A Q RAYLE +C   L++ LE G+  L++  PP   VTHH ++    TLRC AL +YP
Sbjct: 86  IRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHH-VTSSVTTLRCRALNYYP 144

Query: 235 AEITLTWQRDGEDQ-TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKP 293
             IT+ W +D +    ++ E  +  P GD T+Q W  + VP GEEQRYTC V+H GL +P
Sbjct: 145 QNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQP 204

Query: 294 LTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY 344
           L + WEPS   T+ ++G+++G+AV  V++   ++  ++ +R+ S G  G Y
Sbjct: 205 LIVIWEPSPSGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHY 254


>gi|21040351 hemochromatosis protein isoform 8 precursor [Homo
           sapiens]
          Length = 246

 Score =  158 bits (399), Expect = 8e-39
 Identities = 85/231 (36%), Positives = 130/231 (56%), Gaps = 19/231 (8%)

Query: 116 SHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAR 175
           SHTLQ + GC++  D     G+ +Y YDG+D++    D   W AA+  A  T+ +WE  +
Sbjct: 27  SHTLQVILGCEMQEDNST-EGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHK 85

Query: 176 -EAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYP 234
             A Q RAYLE +C   L++ LE G+  L++                  TLRC AL +YP
Sbjct: 86  IRARQNRAYLERDCPAQLQQLLELGRGVLDQ---------------QVTTLRCRALNYYP 130

Query: 235 AEITLTWQRDGEDQ-TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKP 293
             IT+ W +D +    ++ E  +  P GD T+Q W  + VP GEEQRYTC V+H GL +P
Sbjct: 131 QNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQP 190

Query: 294 LTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY 344
           L + WEPS   T+ ++G+++G+AV  V++   ++  ++ +R+ S G  G Y
Sbjct: 191 LIVIWEPSPSGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHY 240


>gi|167857788 MHC class I polypeptide-related sequence B [Homo
           sapiens]
          Length = 383

 Score =  145 bits (366), Expect = 5e-35
 Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 34/351 (9%)

Query: 9   VLLLLSAALALTETWAGS--HSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAAS 66
           VLL L+ A       A +  HS+RY    +S+ G  +  F++ G++D   F+R+D     
Sbjct: 6   VLLFLAVAFPFAPPAAAAEPHSLRYNLMVLSQDGSVQSGFLAEGHLDGQPFLRYDRQKR- 64

Query: 67  PREEPRAPWIEQE-GPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGC 125
            R +P+  W E   G + WD  T+      Q  R +L +++      + G H+LQ +  C
Sbjct: 65  -RAKPQGQWAENVLGAKTWDTETEDLTENGQDLRRTLTHIK----DQKGGLHSLQEIRVC 119

Query: 126 DVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTA-----ADTAAQITQRKW-EAAREAEQ 179
           ++  D    RG   + YDG+ +++ N + +  T      A T A      W E A + + 
Sbjct: 120 EIHEDSST-RGSRHFYYDGELFLSQNLETQESTVPQSSRAQTLAMNVTNFWKEDAMKTKT 178

Query: 180 RRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITL 239
               ++ +C++ L+RYL++G   + R  PP  +VT   +S+   T+ C A  FYP  ITL
Sbjct: 179 HYRAMQADCLQKLQRYLKSGV-AIRRTVPPMVNVTCSEVSEGNITVTCRASSFYPRNITL 237

Query: 240 TWQRDGEDQTQDT-ELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEG------LP- 291
           TW++DG   + +T +  +  P G+ T+Q W A  +  GEEQR+TC+++H G      +P 
Sbjct: 238 TWRQDGVSLSHNTQQWGDVLPDGNGTYQTWVATRIRQGEEQRFTCYMEHSGNHGTHPVPS 297

Query: 292 -KPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKG 341
            K L L+   S ++  P V      A +   VI  ++    C++K+S  +G
Sbjct: 298 GKALVLQ---SQRTDFPYVS-----AAMPCFVIIIILCVPCCKKKTSAAEG 340


>gi|209862839 Fc fragment of IgG, receptor, transporter, alpha [Homo
           sapiens]
          Length = 365

 Score =  142 bits (357), Expect = 6e-34
 Identities = 104/335 (31%), Positives = 166/335 (49%), Gaps = 26/335 (7%)

Query: 9   VLLLLSAALALTETWAGSH-SMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASP 67
           +L LL  +L      A SH S+ Y  T+VS P  G P F   G++   Q++ ++S     
Sbjct: 14  LLFLLPGSLG-----AESHLSLLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNS--LRG 66

Query: 68  REEPRAPWI-EQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCD 126
             EP   W+ E +   YW++ T   + + +   E+ + L G       G +TLQ + GC+
Sbjct: 67  EAEPCGAWVWENQVSWYWEKETTDLRIKEKLFLEAFKALGG------KGPYTLQGLLGCE 120

Query: 127 VGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADT---AAQITQRKWEAAREAEQRRAY 183
           +GPD   +    ++A +G+++  +N DL+  T       A  I+QR  +  + A +   +
Sbjct: 121 LGPDNTSVPTA-KFALNGEEF--MNFDLKQGTWGGDWPEALAISQRWQQQDKAANKELTF 177

Query: 184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243
           L   C   LR +LE G+  LE  +PP   +   P S   + L C A  FYP E+ L + R
Sbjct: 178 LLFSCPHRLREHLERGRGNLEWKEPPSMRLKARPSSPGFSVLTCSAFSFYPPELQLRFLR 237

Query: 244 DGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQ 303
           +G      T   +  P  D +F   +++ V SG+E  Y C VQH GL +PL +  E  ++
Sbjct: 238 NG--LAAGTGQGDFGPNSDGSFHASSSLTVKSGDEHHYCCIVQHAGLAQPLRVELESPAK 295

Query: 304 STVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSG 338
           S+V +VGIV G+ +L    +G    A++ RR  SG
Sbjct: 296 SSVLVVGIVIGVLLLTAAAVG---GALLWRRMRSG 327


>gi|4758346 Fc fragment of IgG, receptor, transporter, alpha [Homo
           sapiens]
          Length = 365

 Score =  142 bits (357), Expect = 6e-34
 Identities = 104/335 (31%), Positives = 166/335 (49%), Gaps = 26/335 (7%)

Query: 9   VLLLLSAALALTETWAGSH-SMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASP 67
           +L LL  +L      A SH S+ Y  T+VS P  G P F   G++   Q++ ++S     
Sbjct: 14  LLFLLPGSLG-----AESHLSLLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNS--LRG 66

Query: 68  REEPRAPWI-EQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCD 126
             EP   W+ E +   YW++ T   + + +   E+ + L G       G +TLQ + GC+
Sbjct: 67  EAEPCGAWVWENQVSWYWEKETTDLRIKEKLFLEAFKALGG------KGPYTLQGLLGCE 120

Query: 127 VGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADT---AAQITQRKWEAAREAEQRRAY 183
           +GPD   +    ++A +G+++  +N DL+  T       A  I+QR  +  + A +   +
Sbjct: 121 LGPDNTSVPTA-KFALNGEEF--MNFDLKQGTWGGDWPEALAISQRWQQQDKAANKELTF 177

Query: 184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243
           L   C   LR +LE G+  LE  +PP   +   P S   + L C A  FYP E+ L + R
Sbjct: 178 LLFSCPHRLREHLERGRGNLEWKEPPSMRLKARPSSPGFSVLTCSAFSFYPPELQLRFLR 237

Query: 244 DGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQ 303
           +G      T   +  P  D +F   +++ V SG+E  Y C VQH GL +PL +  E  ++
Sbjct: 238 NG--LAAGTGQGDFGPNSDGSFHASSSLTVKSGDEHHYCCIVQHAGLAQPLRVELESPAK 295

Query: 304 STVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSG 338
           S+V +VGIV G+ +L    +G    A++ RR  SG
Sbjct: 296 SSVLVVGIVIGVLLLTAAAVG---GALLWRRMRSG 327


>gi|4557751 MHC class I polypeptide-related sequence A [Homo
           sapiens]
          Length = 383

 Score =  140 bits (352), Expect = 2e-33
 Identities = 100/347 (28%), Positives = 164/347 (47%), Gaps = 26/347 (7%)

Query: 9   VLLLLSAALALTETWAGS--HSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAAS 66
           V LLL+         A +  HS+RY  T +S  G  +  F++  ++D   F+R D     
Sbjct: 6   VFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFLRCDRQKC- 64

Query: 67  PREEPRAPWIEQE-GPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGC 125
            R +P+  W E   G + WDR T+      +  R +L +++      + G H+LQ +  C
Sbjct: 65  -RAKPQGQWAEDVLGNKTWDRETRDLTGNGKDLRMTLAHIK----DQKEGLHSLQEIRVC 119

Query: 126 DVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWT------AADTAAQITQRKWEAAREAEQ 179
           ++  D    R    + YDG+ +++ N + + WT      A   A  +     E A + + 
Sbjct: 120 EIHEDNST-RSSQHFYYDGELFLSQNLETKEWTMPQSSRAQTLAMNVRNFLKEDAMKTKT 178

Query: 180 RRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITL 239
               +  +C++ LRRYL++G   L R  PP  +VT    S+   T+ C A GFYP  ITL
Sbjct: 179 HYHAMHADCLQELRRYLKSGV-VLRRTVPPMVNVTRSEASEGNITVTCRASGFYPWNITL 237

Query: 240 TWQRDGEDQTQDT-ELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEG----LPKPL 294
           +W++DG   + DT +  +  P G+ T+Q W A  +  GEEQR+TC+++H G     P P 
Sbjct: 238 SWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEHSGNHSTHPVPS 297

Query: 295 TLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKG 341
                  S      V  VA  A+  +++         C++K+S  +G
Sbjct: 298 GKVLVLQSHWQTFHVSAVAAAAIFVIIIF----YVRCCKKKTSAAEG 340


>gi|21040355 hemochromatosis protein isoform 10 precursor [Homo
           sapiens]
          Length = 168

 Score =  118 bits (295), Expect = 9e-27
 Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 3/138 (2%)

Query: 208 PPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQ-TQDTELVETRPAGDRTFQ 266
           PP   VTHH ++    TLRC AL +YP  IT+ W +D +    ++ E  +  P GD T+Q
Sbjct: 27  PPLVKVTHH-VTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQ 85

Query: 267 KWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAV 326
            W  + VP GEEQRYTC V+H GL +PL + WEPS   T+ ++G+++G+AV  V++   +
Sbjct: 86  GWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPSPSGTL-VIGVISGIAVFVVILFIGI 144

Query: 327 VAAVMCRRKSSGGKGGSY 344
           +  ++ +R+ S G  G Y
Sbjct: 145 LFIILRKRQGSRGAMGHY 162


>gi|21040343 hemochromatosis protein isoform 4 precursor [Homo
           sapiens]
          Length = 256

 Score =  118 bits (295), Expect = 9e-27
 Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 3/138 (2%)

Query: 208 PPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQ-TQDTELVETRPAGDRTFQ 266
           PP   VTHH ++    TLRC AL +YP  IT+ W +D +    ++ E  +  P GD T+Q
Sbjct: 115 PPLVKVTHH-VTSSVTTLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQ 173

Query: 267 KWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAV 326
            W  + VP GEEQRYTC V+H GL +PL + WEPS   T+ ++G+++G+AV  V++   +
Sbjct: 174 GWITLAVPPGEEQRYTCQVEHPGLDQPLIVIWEPSPSGTL-VIGVISGIAVFVVILFIGI 232

Query: 327 VAAVMCRRKSSGGKGGSY 344
           +  ++ +R+ S G  G Y
Sbjct: 233 LFIILRKRQGSRGAMGHY 250



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 6  PRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAA 65
          P  +LL+L     L      SHS+ Y +   S    G   F ++GYVDD  FV +D +  
Sbjct: 7  PALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHE-- 64

Query: 66 SPREEPRAPWIEQE-GPEYWDRNTQIYK 92
          S R EPR PW+      + W + +Q  K
Sbjct: 65 SRRVEPRTPWVSSRISSQMWLQLSQSLK 92


>gi|21040341 hemochromatosis protein isoform 3 precursor [Homo
           sapiens]
          Length = 242

 Score =  108 bits (270), Expect = 7e-24
 Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 2/122 (1%)

Query: 224 TLRCWALGFYPAEITLTWQRDGEDQ-TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYT 282
           TLRC AL +YP  IT+ W +D +    ++ E  +  P GD T+Q W  + VP GEEQRYT
Sbjct: 116 TLRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYT 175

Query: 283 CHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGG 342
           C V+H GL +PL + WEPS   T+ ++G+++G+AV  V++   ++  ++ +R+ S G  G
Sbjct: 176 CQVEHPGLDQPLIVIWEPSPSGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAMG 234

Query: 343 SY 344
            Y
Sbjct: 235 HY 236



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 6  PRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAA 65
          P  +LL+L     L      SHS+ Y +   S    G   F ++GYVDD  FV +D +  
Sbjct: 7  PALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHE-- 64

Query: 66 SPREEPRAPWIEQE-GPEYWDRNTQIYK 92
          S R EPR PW+      + W + +Q  K
Sbjct: 65 SRRVEPRTPWVSSRISSQMWLQLSQSLK 92


>gi|239740918 PREDICTED: similar to major histocompatibility
           complex, class II, DQ beta 1 isoform 1 [Homo sapiens]
          Length = 281

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 20/229 (8%)

Query: 134 LRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREA-EQRRAYLEGECVE-- 190
           +RG  +Y Y+ ++Y   + D+  + A           W + +E  E+ RA L+  C    
Sbjct: 56  VRGVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNY 115

Query: 191 --WLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQ 248
              LR  L+   +      P +T   +H        L C    FYPA+I + W R+ +++
Sbjct: 116 QLELRTTLQRRVEPTVTISPSRTEALNH-----HNLLVCSVTDFYPAQIKVRWFRNDQEE 170

Query: 249 TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVP- 307
           T           GD TFQ    + +       YTCHV+H  L  P+ + W   S+S    
Sbjct: 171 TTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRAQSESAQSK 230

Query: 308 ----IVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY--SQAACS 350
               I G V GL  L    +G ++     + +   GK G +  +Q  CS
Sbjct: 231 MLSGIGGFVLGLIFLG---LGLIIHHRSQKGEEPQGKRGRWAVTQTLCS 276


>gi|169168591 PREDICTED: similar to major histocompatibility
           complex, class II, DR beta 5 isoform 1 [Homo sapiens]
          Length = 261

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 15/200 (7%)

Query: 134 LRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREA-EQRRAYLEGECVE-- 190
           +RG  +Y Y+ ++Y   + D+  + A           W + +E  E+ RA ++  C    
Sbjct: 56  VRGVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRASVDTVCRHNY 115

Query: 191 --WLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQ 248
              LR  L+   +      P +T   +H        L C    FYPA+I + W R+ +++
Sbjct: 116 QLELRTTLQRRVEPTVTISPSRTEALNH-----HNLLVCSVTDFYPAQIKVRWFRNDQEE 170

Query: 249 TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVP- 307
           T           GD TFQ    + +       YTCHV+H  L  P+T+ W   S+S    
Sbjct: 171 TAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRAQSESAQSK 230

Query: 308 ----IVGIVAGLAVLAVVVI 323
               I G V GL  L + +I
Sbjct: 231 MLSGIGGFVLGLIFLGLGLI 250


>gi|4502649 CD1D antigen precursor [Homo sapiens]
          Length = 335

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 23/219 (10%)

Query: 119 LQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQ--------ITQRK 170
           LQ   GC+V P G         A+ GKD ++      SW     A          + Q K
Sbjct: 114 LQVSAGCEVHP-GNASNNFFHVAFQGKDILSFQGT--SWEPTQEAPLWVNLAIQVLNQDK 170

Query: 171 WEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPI-SDHEATLRCWA 229
           W   RE  Q    L G C +++   LE+GK +L++   PK  ++  P        L C  
Sbjct: 171 W--TRETVQW--LLNGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVCHV 226

Query: 230 LGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEG 289
            GFYP  + + W R GE + Q T+  +  P  D T+   A + V +GE    +C V+H  
Sbjct: 227 SGFYPKPVWVKWMR-GEQEQQGTQPGDILPNADETWYLRATLDVVAGEAAGLSCRVKHSS 285

Query: 290 LP-KPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVV 327
           L  + + L W  S  S    +G++A LAVLA ++   +V
Sbjct: 286 LEGQDIVLYWGGSYTS----MGLIA-LAVLACLLFLLIV 319


>gi|239740920 PREDICTED: similar to major histocompatibility
           complex, class II, DQ beta 1 isoform 2 [Homo sapiens]
          Length = 261

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)

Query: 134 LRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREA-EQRRAYLEGECVE-- 190
           +RG  +Y Y+ ++Y   + D+  + A           W + +E  E+ RA L+  C    
Sbjct: 56  VRGVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNY 115

Query: 191 --WLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQ 248
              LR  L+   +      P +T   +H        L C    FYPA+I + W R+ +++
Sbjct: 116 QLELRTTLQRRVEPTVTISPSRTEALNH-----HNLLVCSVTDFYPAQIKVRWFRNDQEE 170

Query: 249 TQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVP- 307
           T           GD TFQ    + +       YTCHV+H  L  P+ + W   S+S    
Sbjct: 171 TTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRAQSESAQSK 230

Query: 308 ----IVGIVAGLAVLAVVVI 323
               I G V GL  L + +I
Sbjct: 231 MLSGIGGFVLGLIFLGLGLI 250


>gi|24797076 major histocompatibility complex, class II, DP beta 1
           precursor [Homo sapiens]
          Length = 258

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 10/210 (4%)

Query: 138 DQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREA-EQRRAYLEGECVEWLRRYL 196
           ++Y Y+ +++   + D+  + A     +     W + ++  E++RA  +  C      Y 
Sbjct: 55  ERYIYNREEFARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDRMC---RHNYE 111

Query: 197 ENGKDKLERADPPKTHVTHH---PISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTE 253
             G   L+R   P+ +V+     P+  H   L C    FYP  I + W  +G+++T    
Sbjct: 112 LGGPMTLQRRVQPRVNVSPSKKGPLQHHNL-LVCHVTDFYPGSIQVRWFLNGQEETAGVV 170

Query: 254 LVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVA 313
                  GD TFQ    + +   +   YTC V+H  L  P+T+ W+  S S        A
Sbjct: 171 STNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKAQSDSARSKTLTGA 230

Query: 314 GLAVLAVVVIGAVVAAVMCRRKSSGGKGGS 343
           G  VL +++ G  V   M RR     +G +
Sbjct: 231 GGFVLGLIICG--VGIFMHRRSKKVQRGSA 258


>gi|110618224 CD1A antigen precursor [Homo sapiens]
          Length = 327

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 66/284 (23%), Positives = 116/284 (40%), Gaps = 31/284 (10%)

Query: 50  GYVDDTQFVRFDSDAASPREEPRAPWIEQE-GPEYWDRNTQIYKAQAQTDRESLRNLRGY 108
           G++ D Q   +DS++++       PW       E W     +++ +     E +R     
Sbjct: 47  GWLSDLQTHTWDSNSSTIVF--LCPWSRGNFSNEEWKELETLFRIRTIRSFEGIRRY--- 101

Query: 109 YNQSEAGSHTLQSMY--------GCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAA 160
                  +H LQ  Y        GC++   G++     Q AY G D+++   +  SW   
Sbjct: 102 -------AHELQFEYPFEIQVTGGCELH-SGKVSGSFLQLAYQGSDFVSFQNN--SWLPY 151

Query: 161 DTAAQITQRKWEAAREAEQRRAY----LEGECVEWLRRYLENGKDKLERADPPKTHVTHH 216
             A  + +   +   + +         L   C  ++   L+ GK  L+R   P+  ++H 
Sbjct: 152 PVAGNMAKHFCKVLNQNQHENDITHNLLSDTCPRFILGLLDAGKAHLQRQVKPEAWLSHG 211

Query: 217 PI-SDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPS 275
           P        L C   GFYP  + + W R GE + Q T+  +  P+ D T+   A + V +
Sbjct: 212 PSPGPGHLQLVCHVSGFYPKPVWVMWMR-GEQEQQGTQRGDILPSADGTWYLRATLEVAA 270

Query: 276 GEEQRYTCHVQHEGLP-KPLTLRWEPSSQSTVPIVGIVAGLAVL 318
           GE    +C V+H  L  + + L WE  S     I+ ++  L +L
Sbjct: 271 GEAADLSCRVKHSSLEGQDIVLYWEHHSSVGFIILAVIVPLLLL 314


>gi|239758095 PREDICTED: similar to major histocompatibility
           complex, class II, DR beta 5 [Homo sapiens]
          Length = 281

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 20/222 (9%)

Query: 142 YDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREA-EQRRAYLEGECVE----WLRRYL 196
           Y+ ++ +  + D+  + A           W + ++  E++RA ++  C       LR  L
Sbjct: 64  YNREEIVRFDSDVGEFRAVTLLGLPAAEYWNSQKDILERKRAAVDRVCRHNYQLELRTTL 123

Query: 197 ENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVE 256
           +   +      P +T   +H        L C    FYPA+I + W R+G+++T       
Sbjct: 124 QRRVEPTVTISPSRTEALNH-----HNLLVCSVTDFYPAQIKVRWFRNGQEETAGVVSTP 178

Query: 257 TRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQSTVP-----IVGI 311
               GD TFQ    + +       YTCHV+H  L  P+T+ W   S+S        I G 
Sbjct: 179 LIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRAQSESAQSKMLSGIGGF 238

Query: 312 VAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY--SQAACSD 351
           V GL  L    +G ++     + +   GK G +  +Q  CS+
Sbjct: 239 VLGLIFLG---LGLIIHHRSQKGEEPQGKRGRWPVTQTLCSE 277


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,057,919
Number of Sequences: 37866
Number of extensions: 705617
Number of successful extensions: 2242
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1991
Number of HSP's gapped (non-prelim): 192
length of query: 362
length of database: 18,247,518
effective HSP length: 104
effective length of query: 258
effective length of database: 14,309,454
effective search space: 3691839132
effective search space used: 3691839132
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.