LOC100293977 23484

Name: LOC100293977	Sequence: fasta or formatted (281aa)		NCBI GI: 239758095
Description: PREDICTED: similar to major histocompatibility complex, class II, DR beta 5		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 14 2 C cysteine 2.1 6 1 D aspartate 3.2 9 1 E glutamate 7.1 20 2 F phenylalanine 3.6 10 1 G glycine 7.1 20 2 H histidine 2.5 7 2 I isoleucine 4.6 13 2 K lysine 3.2 9 2 L leucine 10.0 28 2 M methionine 2.5 7 1 N asparagine 2.8 8 1 P proline 4.6 13 1 Q glutamine 5.0 14 1 R arginine 9.3 26 2 S serine 7.5 21 1 T threonine 7.1 20 2 V valine 8.2 23 2 W tryptophan 2.1 6 1 Y tyrosine 2.5 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to major histocompatibility comp... LOC100294191 1.000 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.995 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.995 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.989 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.918 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.846 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.837 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.784 major histocompatibility complex, class II, DQ beta... LOC100290966 0.585 PREDICTED: hypothetical protein XP_002346811 LOC100294468 0.581 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB5 0.581 major histocompatibility complex, class II, DR beta ... HLA-DPB1 0.580 major histocompatibility complex, class II, DP beta ... HLA-DRB1 0.580 major histocompatibility complex, class II, DR beta... LOC100294189 0.576 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.576 PREDICTED: similar to HLA class II histocompatibili... LOC100294276 0.572 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.561 PREDICTED: similar to major histocompatibility comp... HLA-DRB4 0.559 major histocompatibility complex, class II, DR beta ... LOC100294275 0.559 PREDICTED: similar to major histocompatibility comp... HLA-DRB3 0.554 major histocompatibility complex, class II, DR beta ... LOC100294275 0.550 PREDICTED: similar to major histocompatibility comp... LOC100294189 0.539 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.539 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB4 0.519 PREDICTED: major histocompatibility complex, class ... HLA-DOB 0.508 major histocompatibility complex, class II, DO beta p... LOC100294036 0.477 PREDICTED: similar to HLA class II histocompatibili... LOC100133811 0.413 PREDICTED: similar to HLA class II histocompatibili... LOC651845 0.303 PREDICTED: similar to MHC class II antigen LOC100133661 0.186 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.