HFE 12603

Name: HFE	Sequence: fasta or formatted (260aa)		NCBI GI: 21040349
Description: hemochromatosis protein isoform 7 precursor		Referenced in: HLA and Related Proteins Iron, Copper, and Arsenic Metabolism
Other entries for this name: alt prot [242aa] hemochromatosis protein isoform 3 precursor alt prot [256aa] hemochromatosis protein isoform 4 precursor alt prot [334aa] hemochromatosis protein isoform 6 precursor alt prot [246aa] hemochromatosis protein isoform 8 precursor alt prot [325aa] hemochromatosis protein isoform 9 precursor alt prot [168aa] hemochromatosis protein isoform 10 precursor alt prot [76aa] hemochromatosis protein isoform 11 precursor alt prot [348aa] hemochromatosis protein isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 15 2 C cysteine 1.9 5 1 D aspartate 4.6 12 1 E glutamate 6.5 17 2 F phenylalanine 1.9 5 1 G glycine 7.7 20 1 H histidine 2.7 7 2 I isoleucine 5.4 14 2 K lysine 3.8 10 1 L leucine 12.7 33 4 M methionine 2.3 6 1 N asparagine 1.9 5 1 P proline 6.9 18 2 Q glutamine 7.3 19 2 R arginine 6.9 18 1 S serine 3.1 8 2 T threonine 5.4 14 2 V valine 6.9 18 2 W tryptophan 2.7 7 1 Y tyrosine 3.5 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hemochromatosis protein isoform 7 precursor HFE 0.926 hemochromatosis protein isoform 8 precursor HFE 0.909 hemochromatosis protein isoform 9 precursor HFE 0.909 hemochromatosis protein isoform 1 precursor HFE 0.837 hemochromatosis protein isoform 6 precursor HFE 0.610 hemochromatosis protein isoform 4 precursor HFE 0.555 hemochromatosis protein isoform 3 precursor HFE 0.524 hemochromatosis protein isoform 10 precursor HLA-B 0.295 major histocompatibility complex, class I, B precurs... HLA-F 0.274 major histocompatibility complex, class I, F isofor... HLA-F 0.274 major histocompatibility complex, class I, F isofor... HLA-C 0.274 major histocompatibility complex, class I, C precurs... LOC652614 0.274 PREDICTED: similar to MHC class I antigen HLA-A 0.268 major histocompatibility complex, class I, A precurs... HLA-G 0.260 major histocompatibility complex, class I, G precurso... MR1 0.256 major histocompatibility complex, class I-related [Ho... AZGP1 0.256 alpha-2-glycoprotein 1, zinc HLA-E 0.252 major histocompatibility complex, class I, E precurs... MICA 0.179 MHC class I polypeptide-related sequence A MICB 0.171 MHC class I polypeptide-related sequence B FCGRT 0.163 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.163 Fc fragment of IgG, receptor, transporter, alpha [Hom... HFE 0.144 hemochromatosis protein isoform 11 precursor LOC100294318 0.132 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.132 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.124 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.118 major histocompatibility complex, class II, DQ beta... LOC100294278 0.117 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.117 PREDICTED: similar to major histocompatibility comp... LOC100293977 0.117 PREDICTED: similar to major histocompatibility comp... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.