LOC100294318 16649

Name: LOC100294318	Sequence: fasta or formatted (281aa)		NCBI GI: 239740918
Description: PREDICTED: similar to major histocompatibility complex, class II, DQ beta 1 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {261aa} PREDICTED: similar to major histocompatibility complex, class II,...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 14 2 C cysteine 2.1 6 1 D aspartate 3.2 9 1 E glutamate 7.1 20 2 F phenylalanine 3.2 9 1 G glycine 7.5 21 2 H histidine 2.5 7 2 I isoleucine 4.3 12 2 K lysine 2.8 8 2 L leucine 9.3 26 2 M methionine 2.5 7 1 N asparagine 3.2 9 1 P proline 5.0 14 2 Q glutamine 5.0 14 1 R arginine 8.9 25 2 S serine 6.0 17 1 T threonine 8.2 23 2 V valine 8.5 24 2 W tryptophan 2.1 6 1 Y tyrosine 3.6 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.917 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.913 PREDICTED: similar to major histocompatibility comp... LOC100294115 0.913 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.910 PREDICTED: similar to major histocompatibility comp... LOC100293977 0.908 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.908 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.892 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.819 major histocompatibility complex, class II, DQ beta... LOC100290966 0.557 PREDICTED: hypothetical protein XP_002346811 HLA-DRB4 0.557 major histocompatibility complex, class II, DR beta ... LOC100294468 0.557 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB5 0.553 major histocompatibility complex, class II, DR beta ... LOC100294189 0.553 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.553 PREDICTED: similar to HLA class II histocompatibili... HLA-DRB1 0.552 major histocompatibility complex, class II, DR beta... HLA-DPB1 0.550 major histocompatibility complex, class II, DP beta ... LOC100294276 0.548 PREDICTED: similar to major histocompatibility comp... LOC100294275 0.539 PREDICTED: similar to major histocompatibility comp... LOC100294276 0.537 PREDICTED: similar to major histocompatibility comp... HLA-DRB3 0.532 major histocompatibility complex, class II, DR beta ... LOC100294275 0.532 PREDICTED: similar to major histocompatibility comp... HLA-DRB4 0.517 PREDICTED: major histocompatibility complex, class ... LOC100294189 0.514 PREDICTED: similar to HLA class II histocompatibili... LOC100294161 0.514 PREDICTED: similar to HLA class II histocompatibili... HLA-DOB 0.490 major histocompatibility complex, class II, DO beta p... LOC100294036 0.452 PREDICTED: similar to HLA class II histocompatibili... LOC100133811 0.403 PREDICTED: similar to HLA class II histocompatibili... LOC651845 0.289 PREDICTED: similar to MHC class II antigen LOC100133661 0.203 PREDICTED: similar to MHC class II antigen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.