HLA-F 4795

Name: HLA-F	Sequence: fasta or formatted (346aa)		NCBI GI: 149158698
Description: major histocompatibility complex, class I, F isoform 2 precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [254aa] major histocompatibility complex, class I, F isoform 3 precursor alt prot [442aa] major histocompatibility complex, class I, F isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 35 2 C cysteine 1.2 4 1 D aspartate 5.2 18 2 E glutamate 8.4 29 2 F phenylalanine 2.0 7 1 G glycine 7.5 26 1 H histidine 2.9 10 2 I isoleucine 2.9 10 1 K lysine 2.0 7 2 L leucine 9.2 32 5 M methionine 1.4 5 1 N asparagine 2.0 7 1 P proline 5.8 20 2 Q glutamine 5.8 20 1 R arginine 8.1 28 2 S serine 4.9 17 2 T threonine 6.6 23 2 V valine 6.4 22 3 W tryptophan 2.9 10 1 Y tyrosine 4.6 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class I, F isofor... HLA-F 0.997 major histocompatibility complex, class I, F isofor... HLA-A 0.798 major histocompatibility complex, class I, A precurs... HLA-B 0.783 major histocompatibility complex, class I, B precurs... HLA-G 0.763 major histocompatibility complex, class I, G precurso... HLA-C 0.757 major histocompatibility complex, class I, C precurs... HLA-E 0.715 major histocompatibility complex, class I, E precurs... LOC652614 0.621 PREDICTED: similar to MHC class I antigen HLA-F 0.572 major histocompatibility complex, class I, F isofor... MR1 0.285 major histocompatibility complex, class I-related [Ho... HFE 0.256 hemochromatosis protein isoform 1 precursor AZGP1 0.240 alpha-2-glycoprotein 1, zinc HFE 0.237 hemochromatosis protein isoform 9 precursor HFE 0.233 hemochromatosis protein isoform 6 precursor HFE 0.204 hemochromatosis protein isoform 7 precursor HFE 0.179 hemochromatosis protein isoform 8 precursor FCGRT 0.166 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.166 Fc fragment of IgG, receptor, transporter, alpha [Hom... MICA 0.166 MHC class I polypeptide-related sequence A MICB 0.162 MHC class I polypeptide-related sequence B HFE 0.132 hemochromatosis protein isoform 10 precursor HFE 0.132 hemochromatosis protein isoform 4 precursor HFE 0.120 hemochromatosis protein isoform 3 precursor CD1A 0.082 CD1A antigen precursor LOC100294318 0.072 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.072 PREDICTED: similar to major histocompatibility comp... HLA-DMB 0.069 major histocompatibility complex, class II, DM beta p... LOC100133583 0.068 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.065 major histocompatibility complex, class II, DP beta ... CD1D 0.062 CD1D antigen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.