HLA-C 32309

Name: HLA-C	Sequence: fasta or formatted (366aa)		NCBI GI: 52630342
Description: major histocompatibility complex, class I, C precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 37 2 C cysteine 2.5 9 1 D aspartate 5.7 21 2 E glutamate 7.1 26 1 F phenylalanine 1.6 6 1 G glycine 8.2 30 2 H histidine 2.2 8 2 I isoleucine 2.2 8 1 K lysine 2.7 10 1 L leucine 9.3 34 5 M methionine 2.2 8 2 N asparagine 1.4 5 1 P proline 4.9 18 2 Q glutamine 6.3 23 1 R arginine 8.2 30 2 S serine 7.1 26 2 T threonine 6.8 25 1 V valine 5.5 20 3 W tryptophan 2.5 9 1 Y tyrosine 3.6 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class I, C precurs... HLA-B 0.846 major histocompatibility complex, class I, B precurs... HLA-A 0.804 major histocompatibility complex, class I, A precurs... HLA-G 0.734 major histocompatibility complex, class I, G precurso... HLA-E 0.732 major histocompatibility complex, class I, E precurs... HLA-F 0.723 major histocompatibility complex, class I, F isofor... HLA-F 0.720 major histocompatibility complex, class I, F isofor... LOC652614 0.644 PREDICTED: similar to MHC class I antigen HLA-F 0.407 major histocompatibility complex, class I, F isofor... MR1 0.273 major histocompatibility complex, class I-related [Ho... HFE 0.249 hemochromatosis protein isoform 1 precursor HFE 0.232 hemochromatosis protein isoform 9 precursor HFE 0.223 hemochromatosis protein isoform 6 precursor AZGP1 0.217 alpha-2-glycoprotein 1, zinc HFE 0.194 hemochromatosis protein isoform 7 precursor HFE 0.169 hemochromatosis protein isoform 8 precursor MICA 0.162 MHC class I polypeptide-related sequence A FCGRT 0.159 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.159 Fc fragment of IgG, receptor, transporter, alpha [Hom... MICB 0.155 MHC class I polypeptide-related sequence B HFE 0.126 hemochromatosis protein isoform 10 precursor HFE 0.126 hemochromatosis protein isoform 4 precursor HFE 0.114 hemochromatosis protein isoform 3 precursor CD1A 0.080 CD1A antigen precursor CD1D 0.066 CD1D antigen precursor CD1B 0.066 CD1B antigen precursor LOC100293977 0.062 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.062 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.060 PREDICTED: similar to major histocompatibility comp... HLA-DMB 0.058 major histocompatibility complex, class II, DM beta p... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.