HFE 12605

Name: HFE	Sequence: fasta or formatted (325aa)		NCBI GI: 21040353
Description: hemochromatosis protein isoform 9 precursor		Referenced in: HLA and Related Proteins Iron, Copper, and Arsenic Metabolism
Other entries for this name: alt prot [242aa] hemochromatosis protein isoform 3 precursor alt prot [256aa] hemochromatosis protein isoform 4 precursor alt prot [334aa] hemochromatosis protein isoform 6 precursor alt prot [260aa] hemochromatosis protein isoform 7 precursor alt prot [246aa] hemochromatosis protein isoform 8 precursor alt prot [168aa] hemochromatosis protein isoform 10 precursor alt prot [76aa] hemochromatosis protein isoform 11 precursor alt prot [348aa] hemochromatosis protein isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 15 2 C cysteine 1.5 5 1 D aspartate 5.2 17 2 E glutamate 6.5 21 2 F phenylalanine 2.8 9 1 G glycine 6.8 22 1 H histidine 3.4 11 2 I isoleucine 4.9 16 2 K lysine 3.7 12 1 L leucine 11.7 38 4 M methionine 2.8 9 1 N asparagine 2.2 7 1 P proline 6.5 21 2 Q glutamine 6.8 22 2 R arginine 6.8 22 2 S serine 4.9 16 2 T threonine 5.2 17 2 V valine 7.1 23 2 W tryptophan 3.4 11 1 Y tyrosine 3.4 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hemochromatosis protein isoform 9 precursor HFE 0.976 hemochromatosis protein isoform 1 precursor HFE 0.918 hemochromatosis protein isoform 6 precursor HFE 0.715 hemochromatosis protein isoform 7 precursor HFE 0.658 hemochromatosis protein isoform 8 precursor HFE 0.415 hemochromatosis protein isoform 4 precursor HFE 0.412 hemochromatosis protein isoform 10 precursor HFE 0.376 hemochromatosis protein isoform 3 precursor MR1 0.278 major histocompatibility complex, class I-related [Ho... HLA-B 0.269 major histocompatibility complex, class I, B precurs... HLA-A 0.266 major histocompatibility complex, class I, A precurs... LOC652614 0.263 PREDICTED: similar to MHC class I antigen HLA-C 0.258 major histocompatibility complex, class I, C precurs... HLA-G 0.253 major histocompatibility complex, class I, G precurso... HLA-F 0.250 major histocompatibility complex, class I, F isofor... HLA-F 0.250 major histocompatibility complex, class I, F isofor... HLA-E 0.249 major histocompatibility complex, class I, E precurs... AZGP1 0.234 alpha-2-glycoprotein 1, zinc MICB 0.171 MHC class I polypeptide-related sequence B MICA 0.160 MHC class I polypeptide-related sequence A FCGRT 0.144 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.144 Fc fragment of IgG, receptor, transporter, alpha [Hom... HFE 0.113 hemochromatosis protein isoform 11 precursor LOC100294318 0.096 PREDICTED: similar to major histocompatibility comp... CD1D 0.096 CD1D antigen precursor LOC100294318 0.096 PREDICTED: similar to major histocompatibility comp... HLA-DQB1 0.093 major histocompatibility complex, class II, DQ beta... LOC100133583 0.092 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.085 PREDICTED: similar to major histocompatibility comp... LOC100294278 0.085 PREDICTED: similar to major histocompatibility comp... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.