HLA-B 9679

Name: HLA-B	Sequence: fasta or formatted (362aa)		NCBI GI: 17986001
Description: major histocompatibility complex, class I, B precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.5 38 2 C cysteine 1.7 6 1 D aspartate 6.1 22 2 E glutamate 7.5 27 2 F phenylalanine 1.7 6 1 G glycine 7.5 27 2 H histidine 2.5 9 2 I isoleucine 2.8 10 1 K lysine 2.8 10 1 L leucine 7.7 28 4 M methionine 1.4 5 1 N asparagine 1.4 5 1 P proline 5.0 18 2 Q glutamine 5.5 20 1 R arginine 8.3 30 2 S serine 7.2 26 2 T threonine 6.6 24 1 V valine 6.9 25 3 W tryptophan 2.8 10 1 Y tyrosine 4.4 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class I, B precurs... HLA-C 0.857 major histocompatibility complex, class I, C precurs... HLA-A 0.855 major histocompatibility complex, class I, A precurs... HLA-E 0.765 major histocompatibility complex, class I, E precurs... HLA-G 0.761 major histocompatibility complex, class I, G precurso... HLA-F 0.755 major histocompatibility complex, class I, F isofor... HLA-F 0.754 major histocompatibility complex, class I, F isofor... LOC652614 0.661 PREDICTED: similar to MHC class I antigen HLA-F 0.410 major histocompatibility complex, class I, F isofor... MR1 0.289 major histocompatibility complex, class I-related [Ho... HFE 0.264 hemochromatosis protein isoform 1 precursor AZGP1 0.253 alpha-2-glycoprotein 1, zinc HFE 0.245 hemochromatosis protein isoform 9 precursor HFE 0.238 hemochromatosis protein isoform 6 precursor HFE 0.211 hemochromatosis protein isoform 7 precursor HFE 0.185 hemochromatosis protein isoform 8 precursor MICB 0.167 MHC class I polypeptide-related sequence B FCGRT 0.163 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.163 Fc fragment of IgG, receptor, transporter, alpha [Hom... MICA 0.160 MHC class I polypeptide-related sequence A HFE 0.129 hemochromatosis protein isoform 10 precursor HFE 0.129 hemochromatosis protein isoform 4 precursor HFE 0.115 hemochromatosis protein isoform 3 precursor LOC100294318 0.068 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.067 PREDICTED: similar to major histocompatibility comp... CD1D 0.067 CD1D antigen precursor LOC100294318 0.065 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.064 major histocompatibility complex, class II, DP beta ... CD1A 0.064 CD1A antigen precursor LOC100293977 0.063 PREDICTED: similar to major histocompatibility comp... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.