HLA-A 23976

Name: HLA-A	Sequence: fasta or formatted (365aa)		NCBI GI: 24797067
Description: major histocompatibility complex, class I, A precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 36 2 C cysteine 1.4 5 1 D aspartate 6.6 24 2 E glutamate 6.3 23 2 F phenylalanine 2.2 8 2 G glycine 7.9 29 2 H histidine 2.5 9 2 I isoleucine 3.6 13 2 K lysine 3.0 11 1 L leucine 7.9 29 5 M methionine 2.2 8 1 N asparagine 1.1 4 1 P proline 4.4 16 2 Q glutamine 6.0 22 1 R arginine 7.7 28 2 S serine 6.6 24 2 T threonine 7.9 29 1 V valine 6.0 22 3 W tryptophan 3.0 11 1 Y tyrosine 3.8 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class I, A precurs... HLA-B 0.847 major histocompatibility complex, class I, B precurs... HLA-C 0.806 major histocompatibility complex, class I, C precurs... HLA-G 0.784 major histocompatibility complex, class I, G precurso... HLA-E 0.769 major histocompatibility complex, class I, E precurs... HLA-F 0.762 major histocompatibility complex, class I, F isofor... HLA-F 0.760 major histocompatibility complex, class I, F isofor... LOC652614 0.652 PREDICTED: similar to MHC class I antigen HLA-F 0.393 major histocompatibility complex, class I, F isofor... MR1 0.289 major histocompatibility complex, class I-related [Ho... HFE 0.263 hemochromatosis protein isoform 1 precursor HFE 0.240 hemochromatosis protein isoform 9 precursor HFE 0.240 hemochromatosis protein isoform 6 precursor AZGP1 0.237 alpha-2-glycoprotein 1, zinc HFE 0.190 hemochromatosis protein isoform 7 precursor HFE 0.165 hemochromatosis protein isoform 8 precursor MICB 0.161 MHC class I polypeptide-related sequence B MICA 0.161 MHC class I polypeptide-related sequence A FCGRT 0.157 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.157 Fc fragment of IgG, receptor, transporter, alpha [Hom... HFE 0.114 hemochromatosis protein isoform 10 precursor HFE 0.114 hemochromatosis protein isoform 4 precursor HFE 0.103 hemochromatosis protein isoform 3 precursor CD1A 0.092 CD1A antigen precursor LOC100133583 0.067 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.065 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.065 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.065 major histocompatibility complex, class II, DP beta ... LOC100293977 0.065 PREDICTED: similar to major histocompatibility comp... LOC100294191 0.065 PREDICTED: similar to major histocompatibility comp... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.