HLA-F 4796

Name: HLA-F	Sequence: fasta or formatted (254aa)		NCBI GI: 149158700
Description: major histocompatibility complex, class I, F isoform 3 precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [346aa] major histocompatibility complex, class I, F isoform 2 precursor alt prot [442aa] major histocompatibility complex, class I, F isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 27 2 C cysteine 0.8 2 1 D aspartate 5.1 13 2 E glutamate 7.9 20 2 F phenylalanine 2.0 5 1 G glycine 7.9 20 1 H histidine 1.6 4 1 I isoleucine 2.8 7 1 K lysine 2.0 5 2 L leucine 9.8 25 5 M methionine 2.0 5 1 N asparagine 2.8 7 1 P proline 4.3 11 1 Q glutamine 5.1 13 1 R arginine 9.1 23 2 S serine 6.3 16 2 T threonine 5.9 15 2 V valine 6.3 16 2 W tryptophan 2.4 6 1 Y tyrosine 5.5 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 major histocompatibility complex, class I, F isofor... HLA-F 0.807 major histocompatibility complex, class I, F isofor... HLA-F 0.807 major histocompatibility complex, class I, F isofor... HLA-C 0.603 major histocompatibility complex, class I, C precurs... HLA-B 0.601 major histocompatibility complex, class I, B precurs... HLA-G 0.582 major histocompatibility complex, class I, G precurso... HLA-A 0.580 major histocompatibility complex, class I, A precurs... HLA-E 0.505 major histocompatibility complex, class I, E precurs... LOC652614 0.475 PREDICTED: similar to MHC class I antigen MR1 0.228 major histocompatibility complex, class I-related [Ho... AZGP1 0.179 alpha-2-glycoprotein 1, zinc HFE 0.138 hemochromatosis protein isoform 1 precursor HFE 0.136 hemochromatosis protein isoform 6 precursor HFE 0.110 hemochromatosis protein isoform 9 precursor MICA 0.092 MHC class I polypeptide-related sequence A MICB 0.090 MHC class I polypeptide-related sequence B FCGRT 0.090 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.090 Fc fragment of IgG, receptor, transporter, alpha [Hom... HFE 0.065 hemochromatosis protein isoform 7 precursor HFE 0.063 hemochromatosis protein isoform 8 precursor HFE 0.045 hemochromatosis protein isoform 3 precursor ULBP2 0.045 UL16 binding protein 2 HFE 0.043 hemochromatosis protein isoform 4 precursor PROCR 0.041 endothelial protein C receptor precursor ULBP3 0.039 UL16 binding protein 3 RAET1L 0.031 retinoic acid early transcript 1L RAET1G 0.024 retinoic acid early transcript 1G RAET1E 0.016 retinoic acid early transcript 1E SDF4 0.016 stromal cell derived factor 4 isoform 1 precursor [Ho... SDF4 0.016 stromal cell derived factor 4 isoform 2 precursor [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.