HFE 12604

Name: HFE	Sequence: fasta or formatted (246aa)		NCBI GI: 21040351
Description: hemochromatosis protein isoform 8 precursor		Referenced in: HLA and Related Proteins Iron, Copper, and Arsenic Metabolism
Other entries for this name: alt prot [242aa] hemochromatosis protein isoform 3 precursor alt prot [256aa] hemochromatosis protein isoform 4 precursor alt prot [334aa] hemochromatosis protein isoform 6 precursor alt prot [260aa] hemochromatosis protein isoform 7 precursor alt prot [325aa] hemochromatosis protein isoform 9 precursor alt prot [168aa] hemochromatosis protein isoform 10 precursor alt prot [76aa] hemochromatosis protein isoform 11 precursor alt prot [348aa] hemochromatosis protein isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 15 2 C cysteine 2.0 5 1 D aspartate 4.9 12 1 E glutamate 6.9 17 2 F phenylalanine 2.0 5 1 G glycine 8.1 20 1 H histidine 2.0 5 1 I isoleucine 5.7 14 2 K lysine 3.7 9 1 L leucine 13.0 32 4 M methionine 2.4 6 1 N asparagine 2.0 5 1 P proline 6.5 16 2 Q glutamine 7.7 19 2 R arginine 7.3 18 1 S serine 2.4 6 1 T threonine 4.9 12 2 V valine 5.7 14 2 W tryptophan 2.8 7 1 Y tyrosine 3.7 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hemochromatosis protein isoform 8 precursor HFE 0.979 hemochromatosis protein isoform 7 precursor HFE 0.903 hemochromatosis protein isoform 6 precursor HFE 0.885 hemochromatosis protein isoform 9 precursor HFE 0.885 hemochromatosis protein isoform 1 precursor HFE 0.587 hemochromatosis protein isoform 3 precursor HFE 0.583 hemochromatosis protein isoform 4 precursor HFE 0.499 hemochromatosis protein isoform 10 precursor HLA-B 0.273 major histocompatibility complex, class I, B precurs... LOC652614 0.257 PREDICTED: similar to MHC class I antigen HLA-F 0.255 major histocompatibility complex, class I, F isofor... HLA-F 0.255 major histocompatibility complex, class I, F isofor... HLA-C 0.253 major histocompatibility complex, class I, C precurs... HLA-A 0.246 major histocompatibility complex, class I, A precurs... AZGP1 0.240 alpha-2-glycoprotein 1, zinc HLA-G 0.240 major histocompatibility complex, class I, G precurso... MR1 0.240 major histocompatibility complex, class I-related [Ho... HLA-E 0.232 major histocompatibility complex, class I, E precurs... MICA 0.160 MHC class I polypeptide-related sequence A MICB 0.154 MHC class I polypeptide-related sequence B HFE 0.152 hemochromatosis protein isoform 11 precursor FCGRT 0.152 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.152 Fc fragment of IgG, receptor, transporter, alpha [Hom... LOC100294318 0.119 PREDICTED: similar to major histocompatibility comp... LOC100294318 0.117 PREDICTED: similar to major histocompatibility comp... LOC100133583 0.111 PREDICTED: similar to major histocompatibility comp... HLA-DPB1 0.109 major histocompatibility complex, class II, DP beta ... HLA-DQB1 0.103 major histocompatibility complex, class II, DQ beta... HLA-DRB4 0.103 major histocompatibility complex, class II, DR beta ... HLA-DRB4 0.103 PREDICTED: major histocompatibility complex, class ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.