Guide to the Human Genome
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Name: FCGRT Sequence: fasta or formatted (365aa) NCBI GI: 4758346
Description:

Fc fragment of IgG, receptor, transporter, alpha

Referenced in:

Fc Receptors
HLA and Related Proteins

Other entries for this name:
alt mRNA [365aa] Fc fragment of IgG, receptor, transporter, alpha
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         32           3
 C cysteine            1.6          6           2
 D aspartate           3.6         13           2
 E glutamate           6.0         22           2
 F phenylalanine       4.1         15           1
 G glycine            10.4         38           2
 H histidine           2.2          8           2
 I isoleucine          1.9          7           1
 K lysine              3.8         14           1
 L leucine            14.2         52           3
 M methionine          1.1          4           1
 N asparagine          2.7         10           1
 P proline             7.7         28           2
 Q glutamine           4.1         15           3
 R arginine            4.7         17           2
 S serine              7.9         29           3
 T threonine           4.4         16           2
 V valine              5.2         19           2
 W tryptophan          3.6         13           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fc fragment of IgG, receptor, transporter, alpha [Hom... 
FCGRT                 1.000   Fc fragment of IgG, receptor, transporter, alpha [H...
LOC652614             0.171   PREDICTED: similar to MHC class I antigen 
MR1                   0.169   major histocompatibility complex, class I-related [Ho...
HLA-E                 0.162   major histocompatibility complex, class I, E precurs...
HLA-B                 0.160   major histocompatibility complex, class I, B precurs...
HLA-C                 0.158   major histocompatibility complex, class I, C precurs...
HLA-F                 0.157   major histocompatibility complex, class I, F isofor...
HLA-F                 0.157   major histocompatibility complex, class I, F isofor...
HLA-A                 0.156   major histocompatibility complex, class I, A precurs...
HLA-G                 0.143   major histocompatibility complex, class I, G precurso...
HFE                   0.139   hemochromatosis protein isoform 1 precursor 
AZGP1                 0.132   alpha-2-glycoprotein 1, zinc 
HFE                   0.128   hemochromatosis protein isoform 9 precursor 
HFE                   0.124   hemochromatosis protein isoform 6 precursor 
HFE                   0.115   hemochromatosis protein isoform 7 precursor 
HFE                   0.101   hemochromatosis protein isoform 8 precursor 
MICB                  0.086   MHC class I polypeptide-related sequence B 
MICA                  0.080   MHC class I polypeptide-related sequence A 
CD1A                  0.076   CD1A antigen precursor 
CD1D                  0.070   CD1D antigen precursor 
CD1B                  0.070   CD1B antigen precursor 
CD1E                  0.067   CD1E antigen isoform a precursor 
CD1E                  0.067   CD1E antigen isoform b precursor 
HLA-F                 0.060   major histocompatibility complex, class I, F isofor...
CD1C                  0.055   CD1C antigen precursor 
HFE                   0.053   hemochromatosis protein isoform 4 precursor 
HFE                   0.052   hemochromatosis protein isoform 10 precursor 
HFE                   0.050   hemochromatosis protein isoform 3 precursor 
CD1E                  0.049   CD1E antigen isoform c precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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