CD1D 28398

Name: CD1D	Sequence: fasta or formatted (335aa)		NCBI GI: 4502649
Description: CD1D antigen precursor		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 20 2 C cysteine 2.1 7 1 D aspartate 3.3 11 1 E glutamate 4.8 16 1 F phenylalanine 4.8 16 2 G glycine 8.1 27 2 H histidine 1.8 6 1 I isoleucine 2.4 8 1 K lysine 4.2 14 2 L leucine 13.7 46 3 M methionine 1.2 4 1 N asparagine 2.7 9 2 P proline 4.8 16 1 Q glutamine 7.2 24 2 R arginine 4.8 16 1 S serine 9.3 31 2 T threonine 5.4 18 1 V valine 6.9 23 2 W tryptophan 4.8 16 1 Y tyrosine 2.1 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD1D antigen precursor CD1E 0.503 CD1E antigen isoform a precursor CD1E 0.497 CD1E antigen isoform b precursor CD1A 0.470 CD1A antigen precursor CD1B 0.466 CD1B antigen precursor CD1C 0.446 CD1C antigen precursor CD1E 0.388 CD1E antigen isoform c precursor CD1E 0.330 CD1E antigen isoform d precursor CD1E 0.253 CD1E antigen isoform e precursor CD1E 0.144 CD1E antigen isoform f precursor HFE 0.094 hemochromatosis protein isoform 9 precursor HFE 0.094 hemochromatosis protein isoform 1 precursor HFE 0.088 hemochromatosis protein isoform 6 precursor MR1 0.088 major histocompatibility complex, class I-related [Ho... HFE 0.080 hemochromatosis protein isoform 7 precursor AZGP1 0.079 alpha-2-glycoprotein 1, zinc FCGRT 0.076 Fc fragment of IgG, receptor, transporter, alpha [H... FCGRT 0.076 Fc fragment of IgG, receptor, transporter, alpha [Hom... LOC652614 0.076 PREDICTED: similar to MHC class I antigen HFE 0.074 hemochromatosis protein isoform 8 precursor HLA-C 0.071 major histocompatibility complex, class I, C precurs... HLA-B 0.071 major histocompatibility complex, class I, B precurs... HLA-A 0.065 major histocompatibility complex, class I, A precurs... HLA-F 0.064 major histocompatibility complex, class I, F isofor... HLA-F 0.064 major histocompatibility complex, class I, F isofor... MICA 0.060 MHC class I polypeptide-related sequence A HLA-G 0.058 major histocompatibility complex, class I, G precurso... HLA-E 0.055 major histocompatibility complex, class I, E precurs... PROCR 0.048 endothelial protein C receptor precursor HFE 0.048 hemochromatosis protein isoform 10 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.