HDAC7 9304

Name: HDAC7	Sequence: fasta or formatted (991aa)		NCBI GI: 169234807
Description: histone deacetylase 7 isoform a		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [954aa] histone deacetylase 7 isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 85 2 C cysteine 1.6 16 1 D aspartate 3.9 39 2 E glutamate 6.1 60 4 F phenylalanine 2.2 22 2 G glycine 8.4 83 3 H histidine 3.7 37 3 I isoleucine 2.2 22 1 K lysine 3.1 31 2 L leucine 12.1 120 3 M methionine 1.8 18 1 N asparagine 2.1 21 1 P proline 11.0 109 4 Q glutamine 5.2 52 3 R arginine 6.7 66 3 S serine 9.1 90 4 T threonine 4.2 42 2 V valine 5.8 57 2 W tryptophan 1.0 10 1 Y tyrosine 1.1 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 7 isoform a HDAC7 0.956 histone deacetylase 7 isoform d HDAC4 0.411 histone deacetylase 4 HDAC5 0.350 histone deacetylase 5 isoform 3 HDAC5 0.350 histone deacetylase 5 isoform 1 HDAC9 0.326 histone deacetylase 9 isoform 4 HDAC9 0.326 histone deacetylase 9 isoform 5 HDAC9 0.314 histone deacetylase 9 isoform 1 HDAC9 0.208 histone deacetylase 9 isoform 2 HDAC6 0.131 histone deacetylase 6 HDAC10 0.104 histone deacetylase 10 isoform 1 HDAC10 0.086 histone deacetylase 10 isoform 2 HDAC9 0.045 histone deacetylase 9 isoform 3 HDAC1 0.042 histone deacetylase 1 HDAC2 0.040 histone deacetylase 2 HDAC8 0.035 histone deacetylase 8 HDAC3 0.031 histone deacetylase 3 FLJ22184 0.020 PREDICTED: hypothetical protein FLJ22184 HDAC11 0.017 histone deacetylase 11 isoform 1 FLJ22184 0.017 PREDICTED: hypothetical protein LOC80164 HDAC11 0.016 histone deacetylase 11 isoform 2 PRG4 0.016 proteoglycan 4 isoform D PRG4 0.016 proteoglycan 4 isoform C PRG4 0.016 proteoglycan 4 isoform B PRG4 0.016 proteoglycan 4 isoform A ZNF828 0.015 zinc finger protein 828 C6orf132 0.015 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.015 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.015 PREDICTED: hypothetical protein LOC647024 IL16 0.013 interleukin 16 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.