HDAC4 5228

Name: HDAC4	Sequence: fasta or formatted (1084aa)		NCBI GI: 153085395
Description: histone deacetylase 4		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 95 2 C cysteine 1.3 14 1 D aspartate 3.4 37 2 E glutamate 7.7 84 3 F phenylalanine 2.3 25 2 G glycine 6.5 71 2 H histidine 4.1 44 2 I isoleucine 2.4 26 2 K lysine 4.5 49 3 L leucine 11.4 124 3 M methionine 1.9 21 1 N asparagine 2.7 29 2 P proline 7.9 86 2 Q glutamine 8.4 91 4 R arginine 5.6 61 2 S serine 8.3 90 4 T threonine 4.3 47 2 V valine 6.2 67 2 W tryptophan 0.5 5 1 Y tyrosine 1.7 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 4 HDAC5 0.553 histone deacetylase 5 isoform 1 HDAC5 0.551 histone deacetylase 5 isoform 3 HDAC9 0.523 histone deacetylase 9 isoform 5 HDAC9 0.518 histone deacetylase 9 isoform 4 HDAC9 0.501 histone deacetylase 9 isoform 1 HDAC9 0.397 histone deacetylase 9 isoform 2 HDAC7 0.381 histone deacetylase 7 isoform a HDAC7 0.365 histone deacetylase 7 isoform d HDAC9 0.219 histone deacetylase 9 isoform 3 HDAC6 0.129 histone deacetylase 6 HDAC10 0.100 histone deacetylase 10 isoform 1 HDAC10 0.085 histone deacetylase 10 isoform 2 HDAC8 0.038 histone deacetylase 8 HDAC1 0.037 histone deacetylase 1 HDAC2 0.036 histone deacetylase 2 HDAC3 0.029 histone deacetylase 3 HDAC11 0.017 histone deacetylase 11 isoform 2 HDAC11 0.017 histone deacetylase 11 isoform 1 MAP4K4 0.016 mitogen-activated protein kinase kinase kinase kinas... ZNF853 0.015 zinc finger protein 853 MED15 0.015 mediator complex subunit 15 isoform b MED15 0.014 mediator complex subunit 15 isoform a FOXP2 0.014 forkhead box P2 isoform I FOXP2 0.014 forkhead box P2 isoform II MAP4K4 0.014 mitogen-activated protein kinase kinase kinase kinas... MLL2 0.014 myeloid/lymphoid or mixed-lineage leukemia 2 FOXP2 0.014 forkhead box P2 isoform III TOX3 0.014 TOX high mobility group box family member 3 isoform... TOX3 0.014 TOX high mobility group box family member 3 isoform... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.