HDAC9 25316

Name: HDAC9	Sequence: fasta or formatted (1069aa)		NCBI GI: 30795204
Description: histone deacetylase 9 isoform 5		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [1011aa] histone deacetylase 9 isoform 1 alt prot [879aa] histone deacetylase 9 isoform 2 alt prot [1066aa] histone deacetylase 9 isoform 4 alt prot [590aa] histone deacetylase 9 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 76 2 C cysteine 1.1 12 1 D aspartate 4.2 45 2 E glutamate 7.6 81 3 F phenylalanine 2.1 22 2 G glycine 6.6 71 2 H histidine 3.8 41 2 I isoleucine 3.7 40 2 K lysine 5.3 57 2 L leucine 11.2 120 3 M methionine 2.2 24 3 N asparagine 3.0 32 2 P proline 6.9 74 2 Q glutamine 8.5 91 5 R arginine 4.7 50 2 S serine 9.0 96 4 T threonine 4.9 52 2 V valine 6.0 64 2 W tryptophan 0.5 5 1 Y tyrosine 1.5 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 9 isoform 5 HDAC9 0.995 histone deacetylase 9 isoform 4 HDAC9 0.939 histone deacetylase 9 isoform 1 HDAC9 0.799 histone deacetylase 9 isoform 2 HDAC5 0.547 histone deacetylase 5 isoform 3 HDAC5 0.547 histone deacetylase 5 isoform 1 HDAC4 0.533 histone deacetylase 4 HDAC9 0.522 histone deacetylase 9 isoform 3 HDAC7 0.309 histone deacetylase 7 isoform a HDAC7 0.299 histone deacetylase 7 isoform d HDAC6 0.122 histone deacetylase 6 HDAC10 0.101 histone deacetylase 10 isoform 1 HDAC10 0.084 histone deacetylase 10 isoform 2 HDAC2 0.041 histone deacetylase 2 HDAC1 0.041 histone deacetylase 1 HDAC8 0.039 histone deacetylase 8 HDAC3 0.031 histone deacetylase 3 HDAC11 0.020 histone deacetylase 11 isoform 1 HDAC11 0.020 histone deacetylase 11 isoform 2 ZNF853 0.020 zinc finger protein 853 MED15 0.018 mediator complex subunit 15 isoform b FOXP2 0.016 forkhead box P2 isoform I MAP4K4 0.016 mitogen-activated protein kinase kinase kinase kinas... MED15 0.016 mediator complex subunit 15 isoform a MLL2 0.014 myeloid/lymphoid or mixed-lineage leukemia 2 FOXP2 0.014 forkhead box P2 isoform II FOXP2 0.014 forkhead box P2 isoform III MAP4K4 0.014 mitogen-activated protein kinase kinase kinase kinas... SFRS17A 0.014 DNA segment on chromosome X and Y (unique) 155 expre... MAML2 0.013 mastermind-like 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.