HDAC7 4508

Name: HDAC7	Sequence: fasta or formatted (954aa)		NCBI GI: 148539870
Description: histone deacetylase 7 isoform d		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [991aa] histone deacetylase 7 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 79 2 C cysteine 1.7 16 1 D aspartate 4.1 39 2 E glutamate 6.2 59 4 F phenylalanine 2.2 21 2 G glycine 8.5 81 3 H histidine 3.9 37 3 I isoleucine 2.2 21 1 K lysine 3.2 31 2 L leucine 11.6 111 3 M methionine 1.9 18 1 N asparagine 2.2 21 1 P proline 10.9 104 4 Q glutamine 5.2 50 3 R arginine 6.6 63 3 S serine 9.2 88 4 T threonine 4.1 39 2 V valine 5.8 55 2 W tryptophan 1.0 10 1 Y tyrosine 1.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 7 isoform d HDAC7 0.990 histone deacetylase 7 isoform a HDAC4 0.406 histone deacetylase 4 HDAC5 0.346 histone deacetylase 5 isoform 3 HDAC5 0.346 histone deacetylase 5 isoform 1 HDAC9 0.327 histone deacetylase 9 isoform 4 HDAC9 0.326 histone deacetylase 9 isoform 5 HDAC9 0.314 histone deacetylase 9 isoform 1 HDAC9 0.204 histone deacetylase 9 isoform 2 HDAC6 0.135 histone deacetylase 6 HDAC10 0.108 histone deacetylase 10 isoform 1 HDAC10 0.089 histone deacetylase 10 isoform 2 HDAC1 0.043 histone deacetylase 1 HDAC2 0.041 histone deacetylase 2 HDAC8 0.036 histone deacetylase 8 HDAC9 0.036 histone deacetylase 9 isoform 3 HDAC3 0.032 histone deacetylase 3 FLJ22184 0.020 PREDICTED: hypothetical protein FLJ22184 HDAC11 0.018 histone deacetylase 11 isoform 1 HDAC11 0.017 histone deacetylase 11 isoform 2 MLL2 0.016 myeloid/lymphoid or mixed-lineage leukemia 2 PRG4 0.015 proteoglycan 4 isoform D PRG4 0.015 proteoglycan 4 isoform C PRG4 0.015 proteoglycan 4 isoform B PRG4 0.015 proteoglycan 4 isoform A SRCAP 0.014 Snf2-related CBP activator protein WIPF1 0.013 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.013 WAS/WASL interacting protein family, member 1 C6orf132 0.012 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.012 PREDICTED: chromosome 6 open reading frame 132 [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.