HDAC3 2995

Name: HDAC3	Sequence: fasta or formatted (428aa)		NCBI GI: 13128862
Description: histone deacetylase 3		Referenced in: Histones, Related Proteins, and Modifying Enzymes WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 23 1 C cysteine 2.8 12 1 D aspartate 7.7 33 2 E glutamate 6.3 27 2 F phenylalanine 5.8 25 2 G glycine 7.5 32 4 H histidine 4.4 19 2 I isoleucine 5.1 22 1 K lysine 3.5 15 2 L leucine 8.2 35 2 M methionine 1.9 8 1 N asparagine 4.9 21 2 P proline 4.9 21 1 Q glutamine 4.0 17 1 R arginine 4.2 18 1 S serine 5.1 22 1 T threonine 4.2 18 1 V valine 6.8 29 2 W tryptophan 0.5 2 1 Y tyrosine 6.8 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 3 HDAC1 0.600 histone deacetylase 1 HDAC2 0.596 histone deacetylase 2 HDAC8 0.328 histone deacetylase 8 HDAC9 0.074 histone deacetylase 9 isoform 5 HDAC9 0.074 histone deacetylase 9 isoform 1 HDAC9 0.074 histone deacetylase 9 isoform 4 HDAC5 0.073 histone deacetylase 5 isoform 3 HDAC5 0.073 histone deacetylase 5 isoform 1 HDAC4 0.071 histone deacetylase 4 HDAC7 0.069 histone deacetylase 7 isoform d HDAC7 0.069 histone deacetylase 7 isoform a HDAC6 0.066 histone deacetylase 6 HDAC10 0.059 histone deacetylase 10 isoform 1 HDAC11 0.049 histone deacetylase 11 isoform 1 HDAC11 0.049 histone deacetylase 11 isoform 2 HDAC9 0.047 histone deacetylase 9 isoform 2 HDAC10 0.047 histone deacetylase 10 isoform 2 ANP32E 0.010 acidic (leucine-rich) nuclear phosphoprotein 32 fami... ANP32E 0.010 acidic (leucine-rich) nuclear phosphoprotein 32 fam... ANP32E 0.010 acidic (leucine-rich) nuclear phosphoprotein 32 fam... LOC647055 0.008 PREDICTED: similar to hCG1790759 UPF3A 0.007 UPF3 regulator of nonsense transcripts homolog A iso... UPF3A 0.007 UPF3 regulator of nonsense transcripts homolog A iso... SELE 0.006 selectin E precursor ANP32B 0.006 acidic (leucine-rich) nuclear phosphoprotein 32 famil... PPM1G 0.006 protein phosphatase 1G PPM1G 0.006 protein phosphatase 1G KIF21B 0.005 kinesin family member 21B SNX10 0.005 sorting nexin 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.