HDAC9 9550

Name: HDAC9	Sequence: fasta or formatted (879aa)		NCBI GI: 17158041
Description: histone deacetylase 9 isoform 2		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [1011aa] histone deacetylase 9 isoform 1 alt prot [1066aa] histone deacetylase 9 isoform 4 alt prot [1069aa] histone deacetylase 9 isoform 5 alt prot [590aa] histone deacetylase 9 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 54 2 C cysteine 1.0 9 1 D aspartate 3.9 34 2 E glutamate 7.1 62 3 F phenylalanine 2.2 19 2 G glycine 6.0 53 2 H histidine 4.3 38 2 I isoleucine 3.8 33 1 K lysine 5.6 49 2 L leucine 11.3 99 3 M methionine 2.0 18 3 N asparagine 3.1 27 2 P proline 7.2 63 2 Q glutamine 9.2 81 5 R arginine 5.2 46 2 S serine 10.1 89 4 T threonine 4.6 40 2 V valine 5.5 48 2 W tryptophan 0.3 3 1 Y tyrosine 1.6 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 9 isoform 2 HDAC9 0.977 histone deacetylase 9 isoform 1 HDAC9 0.977 histone deacetylase 9 isoform 4 HDAC9 0.973 histone deacetylase 9 isoform 5 HDAC9 0.639 histone deacetylase 9 isoform 3 HDAC5 0.504 histone deacetylase 5 isoform 3 HDAC5 0.504 histone deacetylase 5 isoform 1 HDAC4 0.493 histone deacetylase 4 HDAC7 0.240 histone deacetylase 7 isoform a HDAC7 0.228 histone deacetylase 7 isoform d HDAC6 0.075 histone deacetylase 6 HDAC10 0.067 histone deacetylase 10 isoform 2 HDAC10 0.067 histone deacetylase 10 isoform 1 HDAC1 0.030 histone deacetylase 1 HDAC2 0.029 histone deacetylase 2 HDAC8 0.028 histone deacetylase 8 HDAC3 0.024 histone deacetylase 3 ZNF853 0.020 zinc finger protein 853 MINK1 0.018 misshapen/NIK-related kinase isoform 2 MINK1 0.018 misshapen/NIK-related kinase isoform 3 MINK1 0.018 misshapen/NIK-related kinase isoform 1 MED15 0.018 mediator complex subunit 15 isoform b FOXP2 0.017 forkhead box P2 isoform I TCHH 0.017 trichohyalin MINK1 0.017 misshapen/NIK-related kinase isoform 4 MLL2 0.016 myeloid/lymphoid or mixed-lineage leukemia 2 TPR 0.016 nuclear pore complex-associated protein TPR MAP4K4 0.016 mitogen-activated protein kinase kinase kinase kinas... FOXP2 0.016 forkhead box P2 isoform II HDAC11 0.015 histone deacetylase 11 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.