HDAC11 13642

Name: HDAC11	Sequence: fasta or formatted (347aa)		NCBI GI: 217272877
Description: histone deacetylase 11 isoform 1		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [296aa] histone deacetylase 11 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 21 1 C cysteine 0.6 2 1 D aspartate 6.1 21 2 E glutamate 6.6 23 2 F phenylalanine 4.0 14 1 G glycine 8.4 29 3 H histidine 2.9 10 2 I isoleucine 7.2 25 2 K lysine 4.9 17 2 L leucine 10.1 35 2 M methionine 2.3 8 1 N asparagine 3.2 11 1 P proline 5.2 18 2 Q glutamine 2.6 9 1 R arginine 7.8 27 2 S serine 4.9 17 2 T threonine 4.9 17 2 V valine 7.8 27 3 W tryptophan 1.4 5 1 Y tyrosine 3.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 11 isoform 1 HDAC11 0.821 histone deacetylase 11 isoform 2 HDAC6 0.083 histone deacetylase 6 HDAC2 0.081 histone deacetylase 2 HDAC1 0.074 histone deacetylase 1 HDAC8 0.072 histone deacetylase 8 HDAC10 0.064 histone deacetylase 10 isoform 1 HDAC3 0.064 histone deacetylase 3 HDAC9 0.062 histone deacetylase 9 isoform 5 HDAC9 0.062 histone deacetylase 9 isoform 1 HDAC9 0.062 histone deacetylase 9 isoform 4 HDAC5 0.058 histone deacetylase 5 isoform 3 HDAC5 0.058 histone deacetylase 5 isoform 1 HDAC4 0.053 histone deacetylase 4 HDAC7 0.050 histone deacetylase 7 isoform d HDAC7 0.050 histone deacetylase 7 isoform a HDAC10 0.041 histone deacetylase 10 isoform 2 HDAC9 0.038 histone deacetylase 9 isoform 2 NOC4L 0.006 nucleolar complex associated 4 homolog C8A 0.006 complement component 8, alpha polypeptide precursor [... KCTD17 0.006 potassium channel tetramerisation domain containing... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.