Guide to the Human Genome
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Name: C6orf132 Sequence: fasta or formatted (1188aa) NCBI GI: 239754327
Description:

PREDICTED: chromosome 6 open reading frame 132

Not currently referenced in the text

Other entries for this name:
alt mRNA {1188aa} PREDICTED: hypothetical protein LOC647024
alt mRNA {1188aa} PREDICTED: chromosome 6 open reading frame 132
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4        124           2
 C cysteine            0.7          8           1
 D aspartate           2.6         31           3
 E glutamate           6.0         71           6
 F phenylalanine       2.4         28           1
 G glycine             8.3         99           3
 H histidine           1.9         22           1
 I isoleucine          1.8         21           1
 K lysine              5.0         59           3
 L leucine             8.1         96           3
 M methionine          0.7          8           1
 N asparagine          2.4         28           2
 P proline            19.3        229           5
 Q glutamine           3.2         38           1
 R arginine            5.7         68           2
 S serine              9.4        112           3
 T threonine           6.6         79           3
 V valine              3.6         43           2
 W tryptophan          0.6          7           1
 Y tyrosine            1.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: chromosome 6 open reading frame 132 [Hom... 
C6orf132              1.000   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              1.000   PREDICTED: hypothetical protein LOC647024 
NACA                  0.055   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.053   PREDICTED: hypothetical protein FLJ22184 
MUC2                  0.051   mucin 2 precursor 
FMN2                  0.046   formin 2 
MLL2                  0.044   myeloid/lymphoid or mixed-lineage leukemia 2 
KDM6B                 0.041   lysine (K)-specific demethylase 6B 
RAPH1                 0.040   Ras association and pleckstrin homology domains 1 is...
PRG4                  0.039   proteoglycan 4 isoform D 
PRG4                  0.039   proteoglycan 4 isoform C 
PRG4                  0.039   proteoglycan 4 isoform B 
PRG4                  0.039   proteoglycan 4 isoform A 
PRB2                  0.035   proline-rich protein BstNI subfamily 2 
TTN                   0.034   titin isoform N2-A 
PCLO                  0.034   piccolo isoform 2 
PCLO                  0.034   piccolo isoform 1 
PTPN23                0.034   protein tyrosine phosphatase, non-receptor type 23 [...
SRCAP                 0.033   Snf2-related CBP activator protein 
FLJ22184              0.032   PREDICTED: hypothetical protein LOC80164 
WIPF3                 0.032   WAS/WASL interacting protein family, member 3 [Homo...
FLJ22184              0.031   PREDICTED: hypothetical protein FLJ22184 
TAF4                  0.031   TBP-associated factor 4 
MBD6                  0.031   methyl-CpG binding domain protein 6 
NHSL1                 0.029   NHS-like 1 
ATN1                  0.029   atrophin-1 
ATN1                  0.029   atrophin-1 
SF3A2                 0.029   splicing factor 3a, subunit 2 
PRR12                 0.029   proline rich 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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