HDAC6 2996

Name: HDAC6	Sequence: fasta or formatted (1215aa)		NCBI GI: 13128864
Description: histone deacetylase 6		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 120 2 C cysteine 2.3 28 1 D aspartate 4.4 54 2 E glutamate 7.2 88 3 F phenylalanine 2.4 29 2 G glycine 8.9 108 2 H histidine 3.8 46 2 I isoleucine 3.5 43 2 K lysine 2.2 27 3 L leucine 10.5 127 2 M methionine 2.8 34 2 N asparagine 2.7 33 1 P proline 5.8 71 3 Q glutamine 5.3 64 2 R arginine 4.6 56 2 S serine 7.0 85 3 T threonine 6.7 82 3 V valine 6.1 74 2 W tryptophan 1.3 16 1 Y tyrosine 2.5 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 6 HDAC10 0.156 histone deacetylase 10 isoform 1 HDAC10 0.140 histone deacetylase 10 isoform 2 HDAC4 0.113 histone deacetylase 4 HDAC5 0.107 histone deacetylase 5 isoform 3 HDAC5 0.107 histone deacetylase 5 isoform 1 HDAC7 0.106 histone deacetylase 7 isoform d HDAC7 0.106 histone deacetylase 7 isoform a HDAC9 0.105 histone deacetylase 9 isoform 5 HDAC9 0.105 histone deacetylase 9 isoform 4 HDAC9 0.099 histone deacetylase 9 isoform 1 HDAC9 0.053 histone deacetylase 9 isoform 2 HDAC8 0.034 histone deacetylase 8 HDAC2 0.032 histone deacetylase 2 HDAC1 0.032 histone deacetylase 1 HDAC3 0.024 histone deacetylase 3 HDAC11 0.023 histone deacetylase 11 isoform 1 HDAC11 0.021 histone deacetylase 11 isoform 2 USP49 0.018 ubiquitin thioesterase 49 USP44 0.017 ubiquitin thiolesterase 44 USP44 0.017 ubiquitin thiolesterase 44 LOC100294501 0.012 PREDICTED: hypothetical protein USP3 0.012 ubiquitin thiolesterase 3 LOC729792 0.012 PREDICTED: hypothetical protein LOC729792 0.012 PREDICTED: hypothetical protein LOC729792 0.012 PREDICTED: hypothetical protein LOC100294249 0.012 PREDICTED: hypothetical protein XP_002344067 LOC100294238 0.012 PREDICTED: hypothetical protein LOC100294204 0.012 PREDICTED: hypothetical protein LOC100294136 0.012 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.