HDAC9 25315

Name: HDAC9	Sequence: fasta or formatted (1066aa)		NCBI GI: 30795202
Description: histone deacetylase 9 isoform 4		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [1011aa] histone deacetylase 9 isoform 1 alt prot [879aa] histone deacetylase 9 isoform 2 alt prot [1069aa] histone deacetylase 9 isoform 5 alt prot [590aa] histone deacetylase 9 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 76 2 C cysteine 1.1 12 1 D aspartate 4.2 45 2 E glutamate 7.6 81 3 F phenylalanine 2.1 22 2 G glycine 6.7 71 2 H histidine 3.8 41 2 I isoleucine 3.8 40 2 K lysine 5.3 57 2 L leucine 11.2 119 3 M methionine 2.3 24 3 N asparagine 3.0 32 2 P proline 6.9 74 2 Q glutamine 8.3 89 5 R arginine 4.7 50 2 S serine 9.0 96 4 T threonine 4.9 52 2 V valine 6.0 64 2 W tryptophan 0.5 5 1 Y tyrosine 1.5 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 9 isoform 4 HDAC9 0.998 histone deacetylase 9 isoform 5 HDAC9 0.944 histone deacetylase 9 isoform 1 HDAC9 0.804 histone deacetylase 9 isoform 2 HDAC5 0.545 histone deacetylase 5 isoform 3 HDAC5 0.545 histone deacetylase 5 isoform 1 HDAC4 0.530 histone deacetylase 4 HDAC9 0.526 histone deacetylase 9 isoform 3 HDAC7 0.310 histone deacetylase 7 isoform a HDAC7 0.300 histone deacetylase 7 isoform d HDAC6 0.123 histone deacetylase 6 HDAC10 0.101 histone deacetylase 10 isoform 1 HDAC10 0.085 histone deacetylase 10 isoform 2 HDAC2 0.041 histone deacetylase 2 HDAC1 0.041 histone deacetylase 1 HDAC8 0.039 histone deacetylase 8 HDAC3 0.031 histone deacetylase 3 HDAC11 0.020 histone deacetylase 11 isoform 1 HDAC11 0.020 histone deacetylase 11 isoform 2 ZNF853 0.016 zinc finger protein 853 MINK1 0.015 misshapen/NIK-related kinase isoform 2 MINK1 0.015 misshapen/NIK-related kinase isoform 3 MINK1 0.015 misshapen/NIK-related kinase isoform 1 MED15 0.015 mediator complex subunit 15 isoform b FOXP2 0.014 forkhead box P2 isoform I TCHH 0.014 trichohyalin MINK1 0.014 misshapen/NIK-related kinase isoform 4 MLL2 0.013 myeloid/lymphoid or mixed-lineage leukemia 2 TPR 0.013 nuclear pore complex-associated protein TPR MAP4K4 0.013 mitogen-activated protein kinase kinase kinase kinas... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.