HDAC9 35923

Name: HDAC9	Sequence: fasta or formatted (590aa)		NCBI GI: 7662280
Description: histone deacetylase 9 isoform 3		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [1011aa] histone deacetylase 9 isoform 1 alt prot [879aa] histone deacetylase 9 isoform 2 alt prot [1066aa] histone deacetylase 9 isoform 4 alt prot [1069aa] histone deacetylase 9 isoform 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 30 2 C cysteine 0.3 2 1 D aspartate 3.6 21 2 E glutamate 7.8 46 3 F phenylalanine 1.4 8 1 G glycine 4.9 29 2 H histidine 3.6 21 2 I isoleucine 3.6 21 2 K lysine 6.9 41 2 L leucine 11.2 66 3 M methionine 2.2 13 3 N asparagine 2.7 16 2 P proline 7.6 45 2 Q glutamine 11.7 69 5 R arginine 5.3 31 2 S serine 10.3 61 4 T threonine 4.7 28 1 V valine 5.9 35 2 W tryptophan 0.2 1 1 Y tyrosine 1.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 9 isoform 3 HDAC9 0.973 histone deacetylase 9 isoform 2 HDAC9 0.973 histone deacetylase 9 isoform 1 HDAC9 0.973 histone deacetylase 9 isoform 4 HDAC9 0.969 histone deacetylase 9 isoform 5 HDAC5 0.418 histone deacetylase 5 isoform 3 HDAC5 0.418 histone deacetylase 5 isoform 1 HDAC4 0.414 histone deacetylase 4 HDAC7 0.080 histone deacetylase 7 isoform a HDAC7 0.061 histone deacetylase 7 isoform d ZNF853 0.030 zinc finger protein 853 MINK1 0.027 misshapen/NIK-related kinase isoform 2 MINK1 0.027 misshapen/NIK-related kinase isoform 3 MINK1 0.027 misshapen/NIK-related kinase isoform 1 MED15 0.027 mediator complex subunit 15 isoform b FOXP2 0.027 forkhead box P2 isoform I TCHH 0.026 trichohyalin MINK1 0.026 misshapen/NIK-related kinase isoform 4 MLL2 0.024 myeloid/lymphoid or mixed-lineage leukemia 2 TPR 0.024 nuclear pore complex-associated protein TPR MAP4K4 0.024 mitogen-activated protein kinase kinase kinase kinas... FOXP2 0.024 forkhead box P2 isoform II FOXP2 0.023 forkhead box P2 isoform III TOX3 0.023 TOX high mobility group box family member 3 isoform... TOX3 0.023 TOX high mobility group box family member 3 isoform... TNIK 0.023 TRAF2 and NCK interacting kinase isoform 3 MED15 0.023 mediator complex subunit 15 isoform a MAML2 0.022 mastermind-like 2 SFRS17A 0.022 DNA segment on chromosome X and Y (unique) 155 expre... MED12 0.022 mediator complex subunit 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.