HDAC9 9549

Name: HDAC9	Sequence: fasta or formatted (1011aa)		NCBI GI: 17158039
Description: histone deacetylase 9 isoform 1		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [879aa] histone deacetylase 9 isoform 2 alt prot [1066aa] histone deacetylase 9 isoform 4 alt prot [1069aa] histone deacetylase 9 isoform 5 alt prot [590aa] histone deacetylase 9 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 67 2 C cysteine 1.1 11 1 D aspartate 4.3 43 2 E glutamate 7.1 72 3 F phenylalanine 2.2 22 2 G glycine 6.7 68 2 H histidine 4.1 41 2 I isoleucine 4.0 40 2 K lysine 5.5 56 2 L leucine 11.4 115 3 M methionine 2.3 23 3 N asparagine 3.2 32 2 P proline 6.9 70 2 Q glutamine 8.4 85 5 R arginine 4.6 47 2 S serine 9.3 94 4 T threonine 4.7 48 2 V valine 5.7 58 2 W tryptophan 0.4 4 1 Y tyrosine 1.5 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 9 isoform 1 HDAC9 0.994 histone deacetylase 9 isoform 4 HDAC9 0.992 histone deacetylase 9 isoform 5 HDAC9 0.848 histone deacetylase 9 isoform 2 HDAC9 0.555 histone deacetylase 9 isoform 3 HDAC5 0.553 histone deacetylase 5 isoform 3 HDAC5 0.553 histone deacetylase 5 isoform 1 HDAC4 0.540 histone deacetylase 4 HDAC7 0.315 histone deacetylase 7 isoform a HDAC7 0.304 histone deacetylase 7 isoform d HDAC6 0.122 histone deacetylase 6 HDAC10 0.101 histone deacetylase 10 isoform 1 HDAC10 0.084 histone deacetylase 10 isoform 2 HDAC2 0.042 histone deacetylase 2 HDAC1 0.042 histone deacetylase 1 HDAC8 0.041 histone deacetylase 8 HDAC3 0.033 histone deacetylase 3 HDAC11 0.021 histone deacetylase 11 isoform 1 HDAC11 0.021 histone deacetylase 11 isoform 2 ZNF853 0.017 zinc finger protein 853 MINK1 0.016 misshapen/NIK-related kinase isoform 2 MINK1 0.016 misshapen/NIK-related kinase isoform 3 MINK1 0.016 misshapen/NIK-related kinase isoform 1 MED15 0.016 mediator complex subunit 15 isoform b FOXP2 0.015 forkhead box P2 isoform I TCHH 0.015 trichohyalin MINK1 0.015 misshapen/NIK-related kinase isoform 4 MLL2 0.014 myeloid/lymphoid or mixed-lineage leukemia 2 TPR 0.014 nuclear pore complex-associated protein TPR MAP4K4 0.014 mitogen-activated protein kinase kinase kinase kinas... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.