HDAC8 37052

Name: HDAC8	Sequence: fasta or formatted (377aa)		NCBI GI: 8923769
Description: histone deacetylase 8		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 28 3 C cysteine 2.7 10 1 D aspartate 6.6 25 3 E glutamate 5.6 21 2 F phenylalanine 3.4 13 2 G glycine 8.8 33 4 H histidine 3.4 13 2 I isoleucine 6.6 25 1 K lysine 5.6 21 2 L leucine 8.5 32 1 M methionine 2.7 10 1 N asparagine 2.7 10 1 P proline 5.0 19 1 Q glutamine 4.0 15 2 R arginine 2.9 11 2 S serine 6.1 23 2 T threonine 4.5 17 1 V valine 6.9 26 2 W tryptophan 1.1 4 1 Y tyrosine 5.6 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 histone deacetylase 8 HDAC2 0.393 histone deacetylase 2 HDAC1 0.393 histone deacetylase 1 HDAC3 0.381 histone deacetylase 3 HDAC4 0.109 histone deacetylase 4 HDAC9 0.109 histone deacetylase 9 isoform 5 HDAC9 0.109 histone deacetylase 9 isoform 1 HDAC9 0.109 histone deacetylase 9 isoform 4 HDAC6 0.109 histone deacetylase 6 HDAC5 0.094 histone deacetylase 5 isoform 3 HDAC5 0.094 histone deacetylase 5 isoform 1 HDAC7 0.091 histone deacetylase 7 isoform d HDAC7 0.091 histone deacetylase 7 isoform a HDAC10 0.089 histone deacetylase 10 isoform 1 HDAC11 0.065 histone deacetylase 11 isoform 1 HDAC9 0.065 histone deacetylase 9 isoform 2 HDAC11 0.062 histone deacetylase 11 isoform 2 HDAC10 0.060 histone deacetylase 10 isoform 2 LOC400696 0.005 hypothetical protein LOC400696 MYO1B 0.005 myosin IB isoform 1 MYO1B 0.005 myosin IB isoform 2 MYO1B 0.005 myosin IB isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.