Guide to the Human Genome
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Name: LOC100131851 Sequence: fasta or formatted (154aa) NCBI GI: 169171388
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {123aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.6         24           3
 C cysteine            1.3          2           1
 D aspartate           4.5          7           1
 E glutamate          11.0         17           2
 F phenylalanine       1.3          2           1
 G glycine            21.4         33           7
 H histidine           1.3          2           1
 I isoleucine          1.3          2           1
 K lysine              3.2          5           1
 L leucine             3.2          5           1
 M methionine          0.6          1           1
 N asparagine          0.6          1           1
 P proline             9.7         15           1
 Q glutamine           2.6          4           1
 R arginine           11.0         17           3
 S serine              7.1         11           2
 T threonine           1.9          3           1
 V valine              0.6          1           1
 W tryptophan          0.6          1           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100130751          1.000   PREDICTED: hypothetical protein 
LOC100131851          0.652   PREDICTED: hypothetical protein 
COL11A2               0.098   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.098   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.098   collagen, type XI, alpha 2 isoform 1 preproprotein ...
COL2A1                0.084   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.084   collagen, type II, alpha 1 isoform 2 precursor [Hom...
COL3A1                0.081   collagen type III alpha 1 preproprotein 
COL1A1                0.081   alpha 1 type I collagen preproprotein 
COL5A3                0.078   collagen, type V, alpha 3 preproprotein 
C6orf174              0.074   hypothetical protein LOC387104 
LOC100130897          0.071   PREDICTED: hypothetical protein 
LOC100130897          0.071   PREDICTED: hypothetical protein 
COL5A1                0.071   alpha 1 type V collagen preproprotein 
COL7A1                0.068   alpha 1 type VII collagen precursor 
COL10A1               0.068   type X collagen alpha 1 precursor 
ARID1B                0.068   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.068   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.068   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
COL9A2                0.068   alpha 2 type IX collagen 
COL1A2                0.068   alpha 2 type I collagen 
COL4A1                0.068   alpha 1 type IV collagen preproprotein 
COL6A2                0.068   alpha 2 type VI collagen isoform 2C2a' precursor [H...
COL6A2                0.068   alpha 2 type VI collagen isoform 2C2a precursor [Ho...
COL6A2                0.068   alpha 2 type VI collagen isoform 2C2 precursor [Hom...
ONECUT2               0.068   one cut domain, family member 2 
COL24A1               0.068   collagen, type XXIV, alpha 1 
TRIO                  0.064   triple functional domain (PTPRF interacting) 
FLJ37078              0.064   hypothetical protein LOC222183 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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