ARID1B 27320

Name: ARID1B	Sequence: fasta or formatted (2231aa)		NCBI GI: 40068466
Description: AT rich interactive domain 1B (SWI1-like) isoform 1		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [2178aa] AT rich interactive domain 1B (SWI1-like) isoform 3 alt prot [2191aa] AT rich interactive domain 1B (SWI1-like) isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 179 11 C cysteine 0.9 19 1 D aspartate 4.0 89 3 E glutamate 4.5 100 3 F phenylalanine 1.8 41 1 G glycine 11.3 251 13 H histidine 2.8 63 6 I isoleucine 2.7 61 2 K lysine 3.6 80 2 L leucine 5.9 132 2 M methionine 4.4 99 3 N asparagine 3.4 76 3 P proline 12.1 269 5 Q glutamine 9.1 203 18 R arginine 3.7 82 3 S serine 11.6 258 4 T threonine 3.3 73 3 V valine 3.2 72 2 W tryptophan 0.6 14 3 Y tyrosine 3.1 70 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.960 AT rich interactive domain 1B (SWI1-like) isoform 3 ... ARID1B 0.958 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1A 0.439 AT rich interactive domain 1A isoform a ARID1A 0.384 AT rich interactive domain 1A isoform b COL2A1 0.022 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.022 alpha 1 type I collagen preproprotein COL2A1 0.021 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL3A1 0.021 collagen type III alpha 1 preproprotein HRNR 0.021 hornerin COL1A2 0.019 alpha 2 type I collagen ARID3A 0.019 AT rich interactive domain 3A (BRIGHT- like) protein ... ATN1 0.018 atrophin-1 ATN1 0.018 atrophin-1 COL11A1 0.017 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.017 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.017 alpha 1 type XI collagen isoform A preproprotein [Ho... FLG2 0.017 filaggrin family member 2 MN1 0.017 meningioma 1 ARID3B 0.017 AT rich interactive domain 3B ARID3C 0.017 AT rich interactive domain 3C (BRIGHT- like) NCOA6 0.017 nuclear receptor coactivator 6 NACA 0.017 nascent polypeptide-associated complex alpha subuni... COL5A2 0.017 alpha 2 type V collagen preproprotein COL16A1 0.016 alpha 1 type XVI collagen precursor LOR 0.016 loricrin COL5A1 0.016 alpha 1 type V collagen preproprotein COL4A1 0.016 alpha 1 type IV collagen preproprotein WIPF1 0.016 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.016 WAS/WASL interacting protein family, member 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.