ARID1B 27318

Name: ARID1B	Sequence: fasta or formatted (2178aa)		NCBI GI: 40068462
Description: AT rich interactive domain 1B (SWI1-like) isoform 3		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [2191aa] AT rich interactive domain 1B (SWI1-like) isoform 2 alt prot [2231aa] AT rich interactive domain 1B (SWI1-like) isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 178 11 C cysteine 0.9 19 1 D aspartate 3.9 86 3 E glutamate 4.5 99 3 F phenylalanine 1.8 40 1 G glycine 11.3 247 13 H histidine 2.8 62 6 I isoleucine 2.7 58 2 K lysine 3.6 79 2 L leucine 6.0 131 2 M methionine 4.5 98 3 N asparagine 3.4 75 3 P proline 11.8 258 5 Q glutamine 9.2 201 18 R arginine 3.8 82 3 S serine 11.1 241 4 T threonine 3.3 71 3 V valine 3.3 71 2 W tryptophan 0.6 13 3 Y tyrosine 3.2 69 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AT rich interactive domain 1B (SWI1-like) isoform 3 ... ARID1B 0.998 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.994 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1A 0.458 AT rich interactive domain 1A isoform a ARID1A 0.401 AT rich interactive domain 1A isoform b COL2A1 0.021 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.020 collagen type III alpha 1 preproprotein COL2A1 0.020 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL1A1 0.020 alpha 1 type I collagen preproprotein COL1A2 0.019 alpha 2 type I collagen ARID3B 0.018 AT rich interactive domain 3B HRNR 0.018 hornerin ARID3A 0.018 AT rich interactive domain 3A (BRIGHT- like) protein ... FLG2 0.017 filaggrin family member 2 ATN1 0.017 atrophin-1 ATN1 0.017 atrophin-1 ARID3C 0.017 AT rich interactive domain 3C (BRIGHT- like) NCOA6 0.017 nuclear receptor coactivator 6 COL11A1 0.017 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.017 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.017 alpha 1 type XI collagen isoform A preproprotein [Ho... COL16A1 0.017 alpha 1 type XVI collagen precursor LOR 0.017 loricrin WIPF1 0.016 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.016 WAS/WASL interacting protein family, member 1 COL4A5 0.016 type IV collagen alpha 5 isoform 1 precursor MN1 0.016 meningioma 1 COL4A5 0.016 type IV collagen alpha 5 isoform 3 precursor COL5A2 0.016 alpha 2 type V collagen preproprotein FLJ22184 0.016 PREDICTED: hypothetical protein FLJ22184 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.