LOC100130128 7629

Name: LOC100130128	Sequence: fasta or formatted (460aa)		NCBI GI: 169167681
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {460aa} PREDICTED: hypothetical protein alt prot {460aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.3 61 3 C cysteine 0.9 4 1 D aspartate 2.8 13 1 E glutamate 4.3 20 1 F phenylalanine 2.2 10 2 G glycine 13.5 62 2 H histidine 2.0 9 1 I isoleucine 0.2 1 1 K lysine 1.1 5 1 L leucine 9.3 43 3 M methionine 0.2 1 1 N asparagine 1.3 6 1 P proline 12.2 56 2 Q glutamine 2.8 13 2 R arginine 15.0 69 3 S serine 9.8 45 2 T threonine 4.3 20 2 V valine 3.7 17 1 W tryptophan 0.9 4 1 Y tyrosine 0.2 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100130128 1.000 PREDICTED: hypothetical protein LOC100130128 0.998 PREDICTED: hypothetical protein COL2A1 0.046 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.046 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.044 collagen type III alpha 1 preproprotein COL1A1 0.043 alpha 1 type I collagen preproprotein FLJ37078 0.038 hypothetical protein LOC222183 COL11A1 0.036 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.036 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.036 alpha 1 type XI collagen isoform A preproprotein [Ho... COL1A2 0.035 alpha 2 type I collagen COL5A1 0.034 alpha 1 type V collagen preproprotein COL5A2 0.033 alpha 2 type V collagen preproprotein COL22A1 0.033 collagen, type XXII, alpha 1 COL7A1 0.033 alpha 1 type VII collagen precursor RAI1 0.032 retinoic acid induced 1 FLJ22184 0.031 PREDICTED: hypothetical protein FLJ22184 COL11A2 0.031 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.031 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.031 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL17A1 0.031 alpha 1 type XVII collagen LOC100292262 0.030 PREDICTED: hypothetical protein COL8A2 0.030 collagen, type VIII, alpha 2 AGAP2 0.030 centaurin, gamma 1 isoform PIKE-L SRRM2 0.030 splicing coactivator subunit SRm300 FLJ22184 0.029 PREDICTED: hypothetical protein FLJ22184 LOC100293055 0.029 PREDICTED: similar to COL22A1 protein LOC643355 0.029 PREDICTED: hypothetical protein FLJ22184 0.029 PREDICTED: hypothetical protein LOC80164 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.