Guide to the Human Genome
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Name: FAM132B Sequence: fasta or formatted (367aa) NCBI GI: 169163362
Description:

PREDICTED: hypothetical protein LOC151176

Not currently referenced in the text

Other entries for this name:
alt mRNA {367aa} PREDICTED: family with sequence similarity 132, member B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         42           2
 C cysteine            2.5          9           1
 D aspartate           3.3         12           4
 E glutamate           5.2         19           1
 F phenylalanine       3.5         13           2
 G glycine            10.6         39           2
 H histidine           1.9          7           1
 I isoleucine          1.9          7           2
 K lysine              2.7         10           2
 L leucine            12.0         44           3
 M methionine          1.4          5           1
 N asparagine          1.6          6           1
 P proline            10.6         39           2
 Q glutamine           2.7         10           1
 R arginine            9.3         34           2
 S serine              7.6         28           3
 T threonine           3.3         12           1
 V valine              6.3         23           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.6          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC151176 
FAM132B               1.000   PREDICTED: family with sequence similarity 132, mem...
FAM132A               0.204   family with sequence similarity 132, member A [Homo...
EDA                   0.035   ectodysplasin A isoform EDA-A2 
EDA                   0.035   ectodysplasin A isoform EDA-A1 
EMID1                 0.035   EMI domain containing 1 
COL2A1                0.033   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.033   collagen, type II, alpha 1 isoform 2 precursor [Hom...
COL5A1                0.033   alpha 1 type V collagen preproprotein 
EMILIN1               0.033   elastin microfibril interfacer 1 
COL11A2               0.032   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.032   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.032   collagen, type XI, alpha 2 isoform 1 preproprotein ...
COL15A1               0.028   alpha 1 type XV collagen precursor 
COL18A1               0.028   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.028   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.028   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
COL12A1               0.028   collagen, type XII, alpha 1 short isoform precursor ...
COL12A1               0.028   collagen, type XII, alpha 1 long isoform precursor [...
COL10A1               0.028   type X collagen alpha 1 precursor 
EMID2                 0.026   EMI domain containing 2 
COL5A2                0.026   alpha 2 type V collagen preproprotein 
C1QL1                 0.026   complement component 1, q subcomponent-like 1 
COL16A1               0.026   alpha 1 type XVI collagen precursor 
COL1A1                0.026   alpha 1 type I collagen preproprotein 
COL11A1               0.026   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.026   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.026   alpha 1 type XI collagen isoform A preproprotein [Ho...
C1QL4                 0.025   complement component 1, q subcomponent-like 4 
COLEC12               0.025   collectin sub-family member 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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