COL15A1 1647

Name: COL15A1	Sequence: fasta or formatted (1388aa)		NCBI GI: 116008152
Description: alpha 1 type XV collagen precursor		Referenced in: Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 108 4 C cysteine 0.7 10 1 D aspartate 4.2 58 2 E glutamate 7.0 97 2 F phenylalanine 3.1 43 2 G glycine 15.9 221 2 H histidine 1.8 25 1 I isoleucine 3.9 54 2 K lysine 3.7 52 2 L leucine 8.1 112 2 M methionine 2.2 30 1 N asparagine 2.7 38 2 P proline 13.8 191 4 Q glutamine 2.9 40 2 R arginine 3.4 47 2 S serine 7.1 99 2 T threonine 5.3 74 2 V valine 4.7 65 3 W tryptophan 0.7 10 1 Y tyrosine 1.0 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 alpha 1 type XV collagen precursor COL18A1 0.234 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.234 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.234 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL5A1 0.136 alpha 1 type V collagen preproprotein COL11A1 0.136 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A2 0.134 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A2 0.134 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.134 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A1 0.134 alpha 1 type XI collagen isoform A preproprotein [Ho... COL4A5 0.131 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.130 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.129 type IV collagen alpha 5 isoform 1 precursor COL2A1 0.123 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.123 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A1 0.123 alpha 1 type XI collagen isoform B preproprotein [Ho... COL1A1 0.120 alpha 1 type I collagen preproprotein COL3A1 0.120 collagen type III alpha 1 preproprotein COL5A2 0.120 alpha 2 type V collagen preproprotein COL4A1 0.119 alpha 1 type IV collagen preproprotein COL7A1 0.119 alpha 1 type VII collagen precursor COL5A3 0.118 collagen, type V, alpha 3 preproprotein COL4A4 0.117 alpha 4 type IV collagen precursor LOC100293055 0.117 PREDICTED: similar to COL22A1 protein COL22A1 0.117 collagen, type XXII, alpha 1 COL27A1 0.115 collagen, type XXVII, alpha 1 COL4A3 0.114 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.114 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.114 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.114 alpha 3 type IV collagen isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.