Guide to the Human Genome
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Name: C1QL4 Sequence: fasta or formatted (238aa) NCBI GI: 56606142
Description:

complement component 1, q subcomponent-like 4

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         21           2
 C cysteine            1.3          3           1
 D aspartate           5.5         13           2
 E glutamate           2.9          7           1
 F phenylalanine       3.8          9           2
 G glycine            16.4         39           2
 H histidine           2.9          7           1
 I isoleucine          2.9          7           2
 K lysine              2.9          7           1
 L leucine             6.3         15           4
 M methionine          2.9          7           1
 N asparagine          2.9          7           1
 P proline            13.4         32           2
 Q glutamine           1.3          3           1
 R arginine            6.3         15           2
 S serine              4.2         10           2
 T threonine           2.1          5           1
 V valine              8.0         19           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 1, q subcomponent-like 4 
C1QL1                 0.674   complement component 1, q subcomponent-like 1 
C1QL3                 0.667   complement component 1, q subcomponent-like 3 
C1QL2                 0.620   complement component 1, q subcomponent-like 2 [Homo...
COL8A1                0.231   alpha 1 type VIII collagen precursor 
COL8A1                0.231   alpha 1 type VIII collagen precursor 
COL10A1               0.223   type X collagen alpha 1 precursor 
C1QB                  0.217   complement component 1, q subcomponent, B chain prec...
C1QC                  0.198   complement component 1, q subcomponent, C chain prec...
C1QC                  0.198   complement component 1, q subcomponent, C chain pre...
COL8A2                0.198   collagen, type VIII, alpha 2 
C1QTNF2               0.190   C1q and tumor necrosis factor related protein 2 [Hom...
ADIPOQ                0.188   adiponectin precursor 
C1QA                  0.182   complement component 1, q subcomponent, A chain precu...
C1QTNF5               0.182   C1q and tumor necrosis factor related protein 5 prec...
C1QTNF7               0.180   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.180   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.180   C1q and tumor necrosis factor related protein 7 iso...
OTOL1                 0.178   hypothetical protein LOC131149 
C1QTNF9               0.176   C1q and tumor necrosis factor related protein 9 [Hom...
C1QTNF9B              0.176   C1q and tumor necrosis factor related protein 9B [Ho...
C1QTNF3               0.169   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF3               0.169   C1q and tumor necrosis factor related protein 3 isof...
EMILIN1               0.151   elastin microfibril interfacer 1 
C1QTNF8               0.138   C1q and tumor necrosis factor related protein 8 [Ho...
CBLN3                 0.134   cerebellin 3 precursor 
CAPRIN2               0.128   C1q domain containing 1 isoform 1 
CAPRIN2               0.128   C1q domain containing 1 isoform 3 
CAPRIN2               0.128   C1q domain containing 1 isoform 2 
CBLN2                 0.128   cerebellin 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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