Guide to the Human Genome
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Name: C1QL1 Sequence: fasta or formatted (258aa) NCBI GI: 5729785
Description:

complement component 1, q subcomponent-like 1

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         20           2
 C cysteine            1.6          4           1
 D aspartate           6.2         16           2
 E glutamate           3.1          8           1
 F phenylalanine       3.1          8           2
 G glycine            17.1         44           2
 H histidine           1.9          5           1
 I isoleucine          3.1          8           2
 K lysine              4.3         11           1
 L leucine             6.6         17           2
 M methionine          1.9          5           1
 N asparagine          3.9         10           2
 P proline            11.2         29           3
 Q glutamine           2.3          6           1
 R arginine            2.7          7           1
 S serine              6.2         16           2
 T threonine           5.4         14           2
 V valine              6.6         17           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 1, q subcomponent-like 1 
C1QL3                 0.728   complement component 1, q subcomponent-like 3 
C1QL2                 0.651   complement component 1, q subcomponent-like 2 [Homo...
C1QL4                 0.625   complement component 1, q subcomponent-like 4 
C1QTNF2               0.205   C1q and tumor necrosis factor related protein 2 [Hom...
C1QB                  0.201   complement component 1, q subcomponent, B chain prec...
C1QTNF9               0.195   C1q and tumor necrosis factor related protein 9 [Hom...
ADIPOQ                0.195   adiponectin precursor 
C1QTNF9B              0.193   C1q and tumor necrosis factor related protein 9B [Ho...
COL10A1               0.193   type X collagen alpha 1 precursor 
C1QTNF7               0.188   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.188   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.188   C1q and tumor necrosis factor related protein 7 iso...
COL8A2                0.182   collagen, type VIII, alpha 2 
OTOL1                 0.182   hypothetical protein LOC131149 
COL8A1                0.182   alpha 1 type VIII collagen precursor 
COL8A1                0.182   alpha 1 type VIII collagen precursor 
C1QA                  0.180   complement component 1, q subcomponent, A chain precu...
C1QTNF3               0.165   C1q and tumor necrosis factor related protein 3 isof...
C1QC                  0.159   complement component 1, q subcomponent, C chain prec...
C1QC                  0.159   complement component 1, q subcomponent, C chain pre...
C1QTNF3               0.159   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF5               0.153   C1q and tumor necrosis factor related protein 5 prec...
EMILIN1               0.153   elastin microfibril interfacer 1 
CAPRIN2               0.119   C1q domain containing 1 isoform 1 
CAPRIN2               0.119   C1q domain containing 1 isoform 3 
CAPRIN2               0.119   C1q domain containing 1 isoform 2 
C1QTNF8               0.113   C1q and tumor necrosis factor related protein 8 [Ho...
C1QTNF6               0.109   C1q and tumor necrosis factor related protein 6 [Hom...
C1QTNF6               0.109   C1q and tumor necrosis factor related protein 6 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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