Guide to the Human Genome
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Name: EMILIN1 Sequence: fasta or formatted (1016aa) NCBI GI: 5901944
Description:

elastin microfibril interfacer 1

Referenced in:

Complement
Extracellular Matrix

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         97           3
 C cysteine            2.3         23           2
 D aspartate           3.5         36           2
 E glutamate           8.7         88           2
 F phenylalanine       1.5         15           1
 G glycine            13.7        139           2
 H histidine           1.9         19           2
 I isoleucine          1.1         11           2
 K lysine              1.1         11           1
 L leucine            13.1        133           2
 M methionine          0.7          7           1
 N asparagine          1.7         17           2
 P proline             7.4         75           2
 Q glutamine           6.7         68           3
 R arginine            7.6         77           2
 S serine              7.9         80           4
 T threonine           3.9         40           2
 V valine              5.6         57           2
 W tryptophan          0.7          7           1
 Y tyrosine            1.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elastin microfibril interfacer 1 
EMILIN2               0.122   elastin microfibril interfacer 2 
EMILIN3               0.067   elastin microfibril interfacer 3 
C1QL1                 0.040   complement component 1, q subcomponent-like 1 
C1QL3                 0.039   complement component 1, q subcomponent-like 3 
C1QL4                 0.036   complement component 1, q subcomponent-like 4 
MMRN2                 0.036   multimerin 2 precursor 
EMID1                 0.034   EMI domain containing 1 
EMID2                 0.034   EMI domain containing 2 
C1QTNF9               0.033   C1q and tumor necrosis factor related protein 9 [Hom...
OTOL1                 0.031   hypothetical protein LOC131149 
C1QL2                 0.031   complement component 1, q subcomponent-like 2 [Homo...
C1QTNF5               0.031   C1q and tumor necrosis factor related protein 5 prec...
COL10A1               0.030   type X collagen alpha 1 precursor 
C1QTNF9B              0.030   C1q and tumor necrosis factor related protein 9B [Ho...
C1QTNF7               0.030   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.030   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.030   C1q and tumor necrosis factor related protein 7 iso...
MMRN1                 0.028   multimerin 1 
C1QB                  0.027   complement component 1, q subcomponent, B chain prec...
COL8A2                0.027   collagen, type VIII, alpha 2 
C1QTNF2               0.027   C1q and tumor necrosis factor related protein 2 [Hom...
C1QC                  0.027   complement component 1, q subcomponent, C chain prec...
C1QC                  0.027   complement component 1, q subcomponent, C chain pre...
C1QTNF3               0.027   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF3               0.027   C1q and tumor necrosis factor related protein 3 isof...
COL8A1                0.026   alpha 1 type VIII collagen precursor 
COL8A1                0.026   alpha 1 type VIII collagen precursor 
COLEC12               0.026   collectin sub-family member 12 
C1QA                  0.025   complement component 1, q subcomponent, A chain precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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