Guide to the Human Genome
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Name: C1QC Sequence: fasta or formatted (245aa) NCBI GI: 166235903
Description:

complement component 1, q subcomponent, C chain precursor

Referenced in:

Complement

Other entries for this name:
alt mRNA [245aa] complement component 1, q subcomponent, C chain precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3          8           1
 C cysteine            1.6          4           1
 D aspartate           3.7          9           1
 E glutamate           2.9          7           2
 F phenylalanine       3.7          9           1
 G glycine            16.7         41           2
 H histidine           2.4          6           1
 I isoleucine          2.9          7           1
 K lysine              4.9         12           1
 L leucine            11.0         27           8
 M methionine          2.4          6           1
 N asparagine          3.7          9           1
 P proline            12.2         30           2
 Q glutamine           4.1         10           1
 R arginine            2.9          7           1
 S serine              4.9         12           2
 T threonine           4.9         12           1
 V valine              7.3         18           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.1         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 1, q subcomponent, C chain pre... 
C1QC                  1.000   complement component 1, q subcomponent, C chain prec...
C1QB                  0.433   complement component 1, q subcomponent, B chain prec...
ADIPOQ                0.270   adiponectin precursor 
C1QTNF5               0.250   C1q and tumor necrosis factor related protein 5 prec...
C1QA                  0.250   complement component 1, q subcomponent, A chain precu...
C1QTNF9               0.226   C1q and tumor necrosis factor related protein 9 [Hom...
C1QTNF9B              0.220   C1q and tumor necrosis factor related protein 9B [Ho...
C1QTNF7               0.218   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.218   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.218   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF2               0.218   C1q and tumor necrosis factor related protein 2 [Hom...
COL8A1                0.214   alpha 1 type VIII collagen precursor 
COL8A1                0.214   alpha 1 type VIII collagen precursor 
COL10A1               0.212   type X collagen alpha 1 precursor 
OTOL1                 0.206   hypothetical protein LOC131149 
COL8A2                0.200   collagen, type VIII, alpha 2 
C1QL4                 0.194   complement component 1, q subcomponent-like 4 
C1QL3                 0.177   complement component 1, q subcomponent-like 3 
C1QL2                 0.177   complement component 1, q subcomponent-like 2 [Homo...
C1QL1                 0.167   complement component 1, q subcomponent-like 1 
COL4A5                0.155   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.155   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.155   type IV collagen alpha 5 isoform 3 precursor 
COL9A3                0.149   alpha 3 type IX collagen 
COL4A1                0.143   alpha 1 type IV collagen preproprotein 
COL4A3                0.143   alpha 3 type IV collagen isoform 5 precursor 
COL4A3                0.143   alpha 3 type IV collagen isoform 4 precursor 
COL4A3                0.143   alpha 3 type IV collagen isoform 2 precursor 
COL4A3                0.143   alpha 3 type IV collagen isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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