Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: C1QL3 Sequence: fasta or formatted (255aa) NCBI GI: 58801559
Description:

complement component 1, q subcomponent-like 3

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         23           2
 C cysteine            1.6          4           1
 D aspartate           5.1         13           2
 E glutamate           3.5          9           1
 F phenylalanine       3.1          8           2
 G glycine            14.5         37           2
 H histidine           2.4          6           1
 I isoleucine          4.3         11           2
 K lysine              4.7         12           1
 L leucine             7.1         18           3
 M methionine          2.7          7           1
 N asparagine          3.9         10           3
 P proline             9.8         25           2
 Q glutamine           2.7          7           1
 R arginine            3.1          8           1
 S serine              5.5         14           2
 T threonine           5.9         15           2
 V valine              5.5         14           2
 W tryptophan          0.4          1           1
 Y tyrosine            5.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 1, q subcomponent-like 3 
C1QL1                 0.745   complement component 1, q subcomponent-like 1 
C1QL2                 0.686   complement component 1, q subcomponent-like 2 [Homo...
C1QL4                 0.633   complement component 1, q subcomponent-like 4 
COL10A1               0.208   type X collagen alpha 1 precursor 
C1QTNF7               0.202   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.202   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.202   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF2               0.202   C1q and tumor necrosis factor related protein 2 [Hom...
C1QB                  0.198   complement component 1, q subcomponent, B chain prec...
COL8A2                0.198   collagen, type VIII, alpha 2 
ADIPOQ                0.198   adiponectin precursor 
C1QTNF9B              0.194   C1q and tumor necrosis factor related protein 9B [Ho...
COL8A1                0.194   alpha 1 type VIII collagen precursor 
COL8A1                0.194   alpha 1 type VIII collagen precursor 
C1QTNF9               0.194   C1q and tumor necrosis factor related protein 9 [Hom...
OTOL1                 0.175   hypothetical protein LOC131149 
C1QC                  0.173   complement component 1, q subcomponent, C chain prec...
C1QC                  0.173   complement component 1, q subcomponent, C chain pre...
C1QTNF5               0.171   C1q and tumor necrosis factor related protein 5 prec...
C1QA                  0.167   complement component 1, q subcomponent, A chain precu...
C1QTNF3               0.165   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF3               0.165   C1q and tumor necrosis factor related protein 3 isof...
EMILIN1               0.155   elastin microfibril interfacer 1 
C1QTNF6               0.120   C1q and tumor necrosis factor related protein 6 [Hom...
C1QTNF6               0.120   C1q and tumor necrosis factor related protein 6 [Hom...
C1QTNF1               0.120   C1q and tumor necrosis factor related protein 1 isof...
C1QTNF1               0.120   C1q and tumor necrosis factor related protein 1 isof...
C1QTNF8               0.116   C1q and tumor necrosis factor related protein 8 [Ho...
CAPRIN2               0.114   C1q domain containing 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press