Guide to the Human Genome
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Name: C1QL2 Sequence: fasta or formatted (287aa) NCBI GI: 154937344
Description:

complement component 1, q subcomponent-like 2

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         26           2
 C cysteine            1.4          4           1
 D aspartate           5.9         17           2
 E glutamate           3.5         10           1
 F phenylalanine       3.1          9           2
 G glycine            16.7         48           3
 H histidine           2.1          6           1
 I isoleucine          2.4          7           1
 K lysine              4.2         12           1
 L leucine             7.7         22           3
 M methionine          2.4          7           2
 N asparagine          3.1          9           3
 P proline            11.1         32           4
 Q glutamine           3.1          9           1
 R arginine            3.1          9           1
 S serine              5.9         17           1
 T threonine           4.5         13           2
 V valine              5.9         17           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 1, q subcomponent-like 2 [Homo... 
C1QL3                 0.604   complement component 1, q subcomponent-like 3 
C1QL1                 0.587   complement component 1, q subcomponent-like 1 
C1QL4                 0.518   complement component 1, q subcomponent-like 4 
COL8A2                0.181   collagen, type VIII, alpha 2 
COL10A1               0.180   type X collagen alpha 1 precursor 
C1QB                  0.180   complement component 1, q subcomponent, B chain prec...
C1QTNF9B              0.168   C1q and tumor necrosis factor related protein 9B [Ho...
C1QTNF9               0.168   C1q and tumor necrosis factor related protein 9 [Hom...
COL8A1                0.164   alpha 1 type VIII collagen precursor 
COL8A1                0.164   alpha 1 type VIII collagen precursor 
C1QTNF2               0.159   C1q and tumor necrosis factor related protein 2 [Hom...
ADIPOQ                0.155   adiponectin precursor 
C1QTNF7               0.154   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.154   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.154   C1q and tumor necrosis factor related protein 7 iso...
C1QC                  0.152   complement component 1, q subcomponent, C chain prec...
C1QC                  0.152   complement component 1, q subcomponent, C chain pre...
OTOL1                 0.145   hypothetical protein LOC131149 
C1QTNF3               0.145   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF3               0.145   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF5               0.143   C1q and tumor necrosis factor related protein 5 prec...
C1QA                  0.133   complement component 1, q subcomponent, A chain precu...
CBLN2                 0.111   cerebellin 2 precursor 
EMILIN1               0.107   elastin microfibril interfacer 1 
CAPRIN2               0.104   C1q domain containing 1 isoform 1 
CAPRIN2               0.104   C1q domain containing 1 isoform 3 
CAPRIN2               0.104   C1q domain containing 1 isoform 2 
CBLN1                 0.102   cerebellin 1 precursor 
CBLN4                 0.097   cerebellin 4 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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