Guide to the Human Genome
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Name: ADIPOQ Sequence: fasta or formatted (244aa) NCBI GI: 4757760
Description:

adiponectin precursor

Referenced in:

Adipose Tissue
Collagen
Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         12           1
 C cysteine            0.8          2           1
 D aspartate           6.1         15           1
 E glutamate           4.9         12           1
 F phenylalanine       4.1         10           1
 G glycine            16.0         39           1
 H histidine           3.3          8           1
 I isoleucine          3.7          9           1
 K lysine              4.9         12           2
 L leucine             9.4         23           4
 M methionine          2.0          5           1
 N asparagine          4.5         11           2
 P proline             7.0         17           1
 Q glutamine           4.1         10           2
 R arginine            2.9          7           1
 S serine              2.9          7           1
 T threonine           6.1         15           3
 V valine              5.7         14           1
 W tryptophan          0.8          2           1
 Y tyrosine            5.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adiponectin precursor 
C1QTNF9               0.328   C1q and tumor necrosis factor related protein 9 [Hom...
OTOL1                 0.326   hypothetical protein LOC131149 
C1QTNF9B              0.324   C1q and tumor necrosis factor related protein 9B [Ho...
C1QTNF7               0.287   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.287   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.287   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF2               0.273   C1q and tumor necrosis factor related protein 2 [Hom...
COL10A1               0.273   type X collagen alpha 1 precursor 
C1QC                  0.271   complement component 1, q subcomponent, C chain prec...
C1QC                  0.271   complement component 1, q subcomponent, C chain pre...
C1QTNF5               0.267   C1q and tumor necrosis factor related protein 5 prec...
COL8A1                0.241   alpha 1 type VIII collagen precursor 
COL8A1                0.241   alpha 1 type VIII collagen precursor 
COL8A2                0.239   collagen, type VIII, alpha 2 
C1QB                  0.223   complement component 1, q subcomponent, B chain prec...
C1QL1                 0.206   complement component 1, q subcomponent-like 1 
C1QL3                 0.204   complement component 1, q subcomponent-like 3 
C1QL4                 0.184   complement component 1, q subcomponent-like 4 
C1QA                  0.182   complement component 1, q subcomponent, A chain precu...
C1QL2                 0.182   complement component 1, q subcomponent-like 2 [Homo...
C1QTNF3               0.168   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF3               0.168   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF1               0.164   C1q and tumor necrosis factor related protein 1 isof...
C1QTNF1               0.164   C1q and tumor necrosis factor related protein 1 [Hom...
C1QTNF1               0.164   C1q and tumor necrosis factor related protein 1 isof...
C1QTNF6               0.150   C1q and tumor necrosis factor related protein 6 [Hom...
C1QTNF6               0.150   C1q and tumor necrosis factor related protein 6 [Hom...
C1QTNF8               0.123   C1q and tumor necrosis factor related protein 8 [Ho...
COL6A1                0.107   collagen, type VI, alpha 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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